Variant report

Variant	rs34409317
Chromosome Location	chr6:82442750-82442751
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 18 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:18)

rs_ID	r²[population]
rs1033825	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10484871	0.82[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs13197254	0.81[AFR][1000 genomes];1.00[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs13212881	0.95[AMR][1000 genomes];0.89[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs13220502	0.90[EUR][1000 genomes]
rs16893407	0.81[AFR][1000 genomes];1.00[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs194941	0.84[AFR][1000 genomes]
rs2295984	0.87[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs2323515	0.81[AFR][1000 genomes];1.00[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs3186631	0.91[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs34138673	0.81[EUR][1000 genomes]
rs3736841	0.88[EUR][1000 genomes]
rs67841418	0.94[EUR][1000 genomes]
rs67880674	0.94[EUR][1000 genomes]
rs72899455	0.84[AMR][1000 genomes];0.83[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs72899456	0.81[AFR][1000 genomes];1.00[AMR][1000 genomes];0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7745467	0.91[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs9449363	0.86[EUR][1000 genomes]

No data

Chromatin state (count:12 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:82422800-82451800	Weak transcription	Aorta	Aorta
2	chr6:82437800-82459400	Weak transcription	Pancreas	Pancrea
3	chr6:82441200-82442800	Enhancers	Right Atrium	heart
4	chr6:82442000-82442800	Enhancers	Fetal Heart	heart
5	chr6:82442000-82445400	Weak transcription	NHDF-Ad	bronchial
6	chr6:82442000-82449600	Weak transcription	Placenta Amnion	Placenta Amnion
7	chr6:82442000-82455000	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
8	chr6:82442000-82456200	Weak transcription	Small Intestine	intestine
9	chr6:82442600-82442800	Enhancers	Psoas Muscle	Psoas
10	chr6:82442600-82442800	Enhancers	Right Ventricle	heart
11	chr6:82442600-82443200	Enhancers	Left Ventricle	heart
12	chr6:82442600-82454400	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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