The 2.0 version of rSNPBase

Variant report

Variant rs34441025
Chromosome Location chr11:16891706-16891707
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:47 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr11:16863800-16892600 Weak transcription Fetal Kidney kidney
2 chr11:16872000-16895800 Weak transcription Aorta Aorta
3 chr11:16876800-16898600 Weak transcription HUES48 Cell Line embryonic stem cell
4 chr11:16877800-16892200 Weak transcription Fetal Stomach stomach
5 chr11:16877800-16899600 Weak transcription Stomach Smooth Muscle stomach
6 chr11:16882400-16894800 Weak transcription Pancreas Pancrea
7 chr11:16882400-16895800 Weak transcription Gastric stomach
8 chr11:16882600-16898400 Weak transcription Ovary ovary
9 chr11:16884600-16897600 Weak transcription Brain Hippocampus Middle brain
10 chr11:16884800-16897600 Weak transcription Brain Anterior Caudate brain
11 chr11:16884800-16900000 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
12 chr11:16885000-16900200 Weak transcription Stomach Mucosa stomach
13 chr11:16885200-16891800 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
14 chr11:16885200-16892400 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
15 chr11:16885200-16894000 Weak transcription Left Ventricle heart
16 chr11:16885200-16894800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
17 chr11:16885200-16894800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
18 chr11:16885200-16902400 Weak transcription H1 Cell Line embryonic stem cell
19 chr11:16885400-16894800 Weak transcription Right Ventricle heart
20 chr11:16885400-16900800 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
21 chr11:16885800-16892000 Weak transcription Rectal Smooth Muscle rectum
22 chr11:16885800-16892800 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
23 chr11:16886800-16893000 Strong transcription Fetal Intestine Small intestine
24 chr11:16887600-16892200 Strong transcription Duodenum Mucosa Duodenum
25 chr11:16888800-16892200 Strong transcription Liver Liver
26 chr11:16888800-16892800 Genic enhancers Fetal Heart heart
27 chr11:16889200-16891800 Strong transcription HepG2 liver
28 chr11:16889200-16892600 Weak transcription HMEC breast
29 chr11:16889600-16891800 Strong transcription Fetal Intestine Large intestine
30 chr11:16890000-16892000 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
31 chr11:16890000-16892800 Strong transcription Esophagus oesophagus
32 chr11:16890200-16895600 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
33 chr11:16890200-16897600 Weak transcription iPS-20b Cell Line embryonic stem cell
34 chr11:16890400-16899000 Weak transcription Adipose Nuclei Adipose
35 chr11:16891000-16892800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
36 chr11:16891000-16893200 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
37 chr11:16891000-16893600 Enhancers HSMMtube muscle
38 chr11:16891000-16894200 Weak transcription Sigmoid Colon Sigmoid Colon
39 chr11:16891000-16900000 Weak transcription Fetal Adrenal Gland Adrenal Gland
40 chr11:16891000-16900800 Weak transcription Rectal Mucosa Donor 31 rectum
41 chr11:16891000-16901000 Weak transcription Lung lung
42 chr11:16891200-16904600 Weak transcription Rectal Mucosa Donor 29 rectum
43 chr11:16891600-16892000 Enhancers Placenta Placenta
44 chr11:16891600-16893000 Enhancers Placenta Amnion Placenta Amnion
45 chr11:16891600-16894000 Enhancers HSMM muscle
46 chr11:16891600-16897600 Enhancers Breast Myoepithelial Primary Cells Breast
47 chr11:16891600-16903600 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived

Quick Search:


  
Input of quick search could be:

what's new

Quick links

Copyright © 2015, Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences. All Rights Reserved Feedback
Last update: Aug 31, 2015