Variant report

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr2:33848285..33850159-chr2:33851964..33854579,2	MCF-7	breast:

rSNPs within LD-proxies of this variant (count:23)

rs_ID	r²[population]
rs11884952	0.90[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12712342	0.98[AFR][1000 genomes];0.89[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12990303	1.00[AFR][1000 genomes];0.94[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs13013041	0.86[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs13020506	0.80[AFR][1000 genomes]
rs17013637	0.85[AFR][1000 genomes]
rs17013639	0.85[AFR][1000 genomes]
rs2887089	1.00[ASN][1000 genomes]
rs34321218	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs35630933	1.00[AFR][1000 genomes];0.94[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs55890165	0.84[AFR][1000 genomes]
rs6543734	1.00[ASN][1000 genomes]
rs6724572	1.00[ASN][1000 genomes]
rs6740009	1.00[ASN][1000 genomes]
rs72787819	1.00[ASN][1000 genomes]
rs72787820	1.00[ASN][1000 genomes]
rs72787830	1.00[ASN][1000 genomes]
rs73928937	0.82[AFR][1000 genomes]
rs73928946	0.95[AFR][1000 genomes]
rs73928948	0.82[AFR][1000 genomes]
rs73928949	0.82[AFR][1000 genomes]
rs73928956	0.83[AFR][1000 genomes]
rs7559158	0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv3335549	chr2:33848512-33850576	Weak transcription Enhancers	Chromatin interactive region	n/a	inside rSNPs	n/a

No data

Chromatin state (count:3 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr2:33845200-33859400	Weak transcription	H9 Cell Line	embryonic stem cell
2	chr2:33845200-33859600	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
3	chr2:33845600-33849400	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell

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