Variant report

Variant	rs34587451
Chromosome Location	chr7:117270181-117270182
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 39 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:39)

rs_ID	r²[population]
rs10244810	0.89[EUR][1000 genomes]
rs10246649	0.96[EUR][1000 genomes]
rs1800130	0.87[EUR][1000 genomes]
rs28449716	0.96[EUR][1000 genomes]
rs28472519	0.96[EUR][1000 genomes]
rs34034651	0.96[EUR][1000 genomes]
rs34151592	0.89[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs34201995	0.89[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs34309075	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs34464201	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs34480179	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs34489981	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs34511745	0.89[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs34567454	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs34652497	0.86[EUR][1000 genomes]
rs34674313	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs34830471	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs34830562	0.83[EUR][1000 genomes]
rs34849722	0.86[EUR][1000 genomes]
rs34995970	0.92[AFR][1000 genomes];0.89[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs35294574	1.00[AFR][1000 genomes];0.90[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs35305858	0.89[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs35320768	1.00[AFR][1000 genomes];0.81[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs35475211	0.96[EUR][1000 genomes]
rs35504264	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs35506750	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs35537814	0.93[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs35553213	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs35783977	0.83[EUR][1000 genomes]
rs35836271	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs35900505	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs35916162	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs36042090	0.96[EUR][1000 genomes]
rs36046385	0.86[EUR][1000 genomes]
rs36117041	0.89[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs4148717	0.96[EUR][1000 genomes]
rs6965682	0.96[EUR][1000 genomes]
rs6968747	0.96[EUR][1000 genomes]
rs7809485	0.96[EUR][1000 genomes]

No data

Chromatin state (count:12 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:117245200-117294000	Weak transcription	Pancreas	Pancrea
2	chr7:117258200-117286600	Weak transcription	Rectal Mucosa Donor 31	rectum
3	chr7:117261200-117270600	Weak transcription	Fetal Intestine Small	intestine
4	chr7:117265600-117271600	Weak transcription	Duodenum Mucosa	Duodenum
5	chr7:117267200-117271800	Strong transcription	Fetal Intestine Large	intestine
6	chr7:117267800-117270400	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
7	chr7:117268200-117270200	Weak transcription	H1 Cell Line	embryonic stem cell
8	chr7:117268800-117270400	Enhancers	Dnd41	blood
9	chr7:117269400-117283000	Weak transcription	Rectal Mucosa Donor 29	rectum
10	chr7:117270000-117270800	Enhancers	HUES48 Cell Line	embryonic stem cell
11	chr7:117270000-117270800	Enhancers	iPS-18 Cell Line	embryonic stem cell
12	chr7:117270000-117270800	Enhancers	Stomach Mucosa	stomach

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