Variant report

Variant rs34980504
Chromosome Location chr5:43483544-43483545
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:127 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:43482200-43484600 Active TSS HSMMtube muscle
2 chr5:43482400-43484600 Active TSS hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
3 chr5:43482400-43484600 Active TSS Foreskin Fibroblast Primary Cells skin01 Skin
4 chr5:43482400-43484600 Active TSS A549 lung
5 chr5:43482400-43484600 Active TSS GM12878-XiMat blood
6 chr5:43482400-43484600 Active TSS K562 blood
7 chr5:43482400-43484600 Active TSS NHLF lung
8 chr5:43482600-43483600 Flanking Active TSS Primary hematopoietic stem cells short term culture blood
9 chr5:43482600-43484600 Active TSS Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
10 chr5:43482600-43484600 Active TSS HMEC breast
11 chr5:43482600-43484600 Active TSS NHDF-Ad bronchial
12 chr5:43482600-43484600 Active TSS NHEK skin
13 chr5:43482600-43484800 Active TSS ES-WA7 Cell Line embryonic stem cell
14 chr5:43482600-43484800 Active TSS HUES6 Cell Line embryonic stem cell
15 chr5:43482600-43485200 Active TSS iPS-20b Cell Line embryonic stem cell
16 chr5:43482800-43483600 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Male --
17 chr5:43482800-43483800 Active TSS Right Atrium heart
18 chr5:43482800-43483800 Flanking Active TSS Stomach Smooth Muscle stomach
19 chr5:43482800-43484600 Active TSS ES-I3 Cell Line embryonic stem cell
20 chr5:43482800-43484600 Active TSS IMR90 fetal lung fibroblasts Cell Line lung
21 chr5:43482800-43484600 Active TSS iPS-15b Cell Line embryonic stem cell
22 chr5:43482800-43484600 Active TSS Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
23 chr5:43482800-43484600 Active TSS Muscle Satellite Cultured Cells --
24 chr5:43482800-43484600 Active TSS Fetal Muscle Leg muscle
25 chr5:43482800-43484800 Active TSS H1 Cell Line embryonic stem cell
26 chr5:43482800-43484800 Active TSS hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
27 chr5:43482800-43484800 Active TSS Pancreatic Islets Pancreatic Islet
28 chr5:43482800-43484800 Active TSS Right Ventricle heart
29 chr5:43482800-43485000 Active TSS HUES48 Cell Line embryonic stem cell
30 chr5:43482800-43485000 Active TSS Foreskin Fibroblast Primary Cells skin02 Skin
31 chr5:43483000-43483600 Flanking Active TSS Primary T cells from cord blood blood
32 chr5:43483000-43483600 Flanking Active TSS Primary hematopoietic stem cells blood
33 chr5:43483000-43483600 Flanking Active TSS Primary T regulatory cells fromperipheralblood blood
34 chr5:43483000-43483600 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Female --
35 chr5:43483000-43483600 Flanking Active TSS Liver Liver
36 chr5:43483000-43484600 Active TSS hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
37 chr5:43483000-43484600 Active TSS Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
38 chr5:43483000-43484600 Active TSS Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
39 chr5:43483000-43484600 Active TSS Primary T cells fromperipheralblood blood
40 chr5:43483000-43484600 Active TSS Foreskin Melanocyte Primary Cells skin03 Skin
41 chr5:43483000-43484600 Active TSS Brain Dorsolateral Prefrontal Cortex brain
42 chr5:43483000-43484600 Active TSS Fetal Brain Female brain
43 chr5:43483000-43484600 Active TSS Fetal Intestine Large intestine
44 chr5:43483000-43484600 Active TSS Fetal Intestine Small intestine
45 chr5:43483000-43484600 Active TSS Thymus Thymus
46 chr5:43483000-43484800 Active TSS H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
47 chr5:43483000-43484800 Active TSS H9 Cell Line embryonic stem cell
48 chr5:43483000-43484800 Active TSS Foreskin Melanocyte Primary Cells skin01 Skin
49 chr5:43483000-43484800 Active TSS Brain Inferior Temporal Lobe brain
50 chr5:43483000-43484800 Active TSS Duodenum Smooth Muscle Duodenum

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