Variant report

Variant	rs35061417
Chromosome Location	chr7:136609613-136609614
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 9 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:7)

rs_ID	r²[population]
rs10271552	0.81[EUR][1000 genomes]
rs13438626	0.83[EUR][1000 genomes]
rs35345724	0.81[EUR][1000 genomes]
rs36210734	0.81[EUR][1000 genomes]
rs67514280	0.81[EUR][1000 genomes]
rs71541331	0.81[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs7791871	0.83[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1029192	chr7:136433278-137147566	Weak transcription Enhancers Flanking Active TSS Bivalent Enhancer Active TSS Strong transcription Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent/Poised TSS Genic enhancers ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	23 gene(s)	inside rSNPs	diseases
2	nsv831147	chr7:136583444-136755741	Enhancers Weak transcription ZNF genes & repeats Strong transcription Flanking Active TSS Genic enhancers Active TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	8 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:23 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:136605200-136612200	Genic enhancers	IMR90 fetal lung fibroblasts Cell Line	lung
2	chr7:136605400-136610600	Weak transcription	Fetal Adrenal Gland	Adrenal Gland
3	chr7:136606400-136609800	Enhancers	Fetal Heart	heart
4	chr7:136607000-136610600	Weak transcription	Right Ventricle	heart
5	chr7:136607000-136612200	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--
6	chr7:136607800-136611200	Weak transcription	Rectal Smooth Muscle	rectum
7	chr7:136607800-136638000	Weak transcription	NHLF	lung
8	chr7:136608400-136610400	Weak transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
9	chr7:136608600-136610400	Weak transcription	Stomach Smooth Muscle	stomach
10	chr7:136608600-136610800	Enhancers	Primary hematopoietic stem cells	blood
11	chr7:136609000-136612000	Enhancers	Primary hematopoietic stem cells short term culture	blood
12	chr7:136609400-136610000	Enhancers	Hela-S3	cervix
13	chr7:136609400-136610400	Enhancers	NH-A	brain
14	chr7:136609400-136610800	Flanking Active TSS	Primary hematopoietic stem cells G-CSF-mobilized Male	--
15	chr7:136609400-136610800	Enhancers	Colon Smooth Muscle	Colon
16	chr7:136609400-136610800	Enhancers	Fetal Stomach	stomach
17	chr7:136609600-136610400	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
18	chr7:136609600-136610400	Flanking Active TSS	HUVEC	blood vessel
19	chr7:136609600-136610600	Weak transcription	Fetal Lung	lung
20	chr7:136609600-136610600	Weak transcription	Left Ventricle	heart
21	chr7:136609600-136610600	Enhancers	Osteobl	bone
22	chr7:136609600-136610800	Enhancers	Duodenum Smooth Muscle	Duodenum
23	chr7:136609600-136613600	Weak transcription	H9 Cell Line	embryonic stem cell

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