Variant report

Variant	rs35112434
Chromosome Location	chr15:72448326-72448327
allele	G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	CTCF	chr15:72448311-72448729	HepG2	liver:	n/a	chr15:72448543-72448556 chr15:72448541-72448559
2	TCF12	chr15:72447141-72448639	ECC-1	luminal epithelium:	n/a	chr15:72447543-72447553 chr15:72447833-72447840
3	RAD21	chr15:72447870-72448954	MCF-7	breast:	n/a	chr15:72448539-72448558
4	RAD21	chr15:72448083-72448894	MCF-7	breast:	n/a	chr15:72448539-72448558
5	CHD1	chr15:72447635-72448867	IMR90	lung:	n/a	n/a
6	SMC3	chr15:72447140-72448918	SK-N-SH	brain:	n/a	chr15:72448543-72448557
7	TCF12	chr15:72447156-72448931	A549	lung:	n/a	chr15:72447543-72447553 chr15:72447833-72447840
8	BCLAF1	chr15:72448243-72448704	GM12878	blood:	n/a	n/a
9	MAZ	chr15:72448269-72448682	GM12878	blood:	n/a	n/a
10	RAD21	chr15:72448108-72448736	A549	lung:	n/a	chr15:72448539-72448558
11	ZEB1	chr15:72448166-72448407	GM12878	blood:	n/a	n/a
12	TCF12	chr15:72447100-72448524	ECC-1	luminal epithelium:	n/a	chr15:72447543-72447553 chr15:72447833-72447840
13	ATF3	chr15:72448203-72448771	A549	lung:	n/a	n/a
14	NFIC	chr15:72446994-72448594	ECC-1	luminal epithelium:	n/a	chr15:72447488-72447504 chr15:72447723-72447739
15	CTCF	chr15:72448308-72448724	A549	lung:	n/a	chr15:72448543-72448556 chr15:72448541-72448559
16	RAD21	chr15:72448060-72448779	H1-hESC	embryonic stem cell:	n/a	chr15:72448539-72448558
17	ELF1	chr15:72448319-72448775	HepG2	liver:	n/a	n/a
18	RUNX3	chr15:72448148-72448646	GM12878	blood:	n/a	n/a
19	CTCF	chr15:72448231-72448933	HCT-116	colon:	n/a	chr15:72448543-72448556 chr15:72448541-72448559
20	RAD21	chr15:72448301-72448696	SK-N-SH_RA	brain:	n/a	chr15:72448539-72448558
21	MAX	chr15:72447088-72448645	ECC-1	luminal epithelium:	n/a	n/a
22	YY1	chr15:72448244-72448690	GM12878	blood:	n/a	n/a
23	CREB1	chr15:72448312-72448728	A549	lung:	n/a	n/a
24	RAD21	chr15:72448154-72448812	HCT-116	colon:	n/a	chr15:72448539-72448558
25	RAD21	chr15:72448318-72448768	Hela-S3	cervix:	n/a	chr15:72448539-72448558
26	NFIC	chr15:72447091-72448744	ECC-1	luminal epithelium:	n/a	chr15:72447488-72447504 chr15:72447723-72447739
27	SMC3	chr15:72448136-72448825	Hela-S3	cervix:	n/a	chr15:72448543-72448557
28	ELF1	chr15:72448197-72448773	A549	lung:	n/a	n/a
29	RAD21	chr15:72448140-72448772	HepG2	liver:	n/a	chr15:72448539-72448558
30	RAD21	chr15:72448253-72448716	GM12878	blood:	n/a	chr15:72448539-72448558
31	ZNF263	chr15:72447523-72448903	HEK293-T-REx	kidney:	n/a	n/a
32	RCOR1	chr15:72448268-72448706	GM12878	blood:	n/a	n/a
33	SPI1	chr15:72448195-72448743	GM12878	blood:	n/a	n/a
34	RAD21	chr15:72448090-72448780	H1-hESC	embryonic stem cell:	n/a	chr15:72448539-72448558
35	RAD21	chr15:72448098-72448820	A549	lung:	n/a	chr15:72448539-72448558
36	RAD21	chr15:72448321-72448812	HepG2	liver:	n/a	chr15:72448539-72448558
37	SPI1	chr15:72448016-72448740	GM12878	blood:	n/a	n/a
38	E2F6	chr15:72447393-72448686	A549	lung:	n/a	n/a
39	GTF2F1	chr15:72448288-72448618	H1-hESC	embryonic stem cell:	n/a	n/a
40	RAD21	chr15:72448271-72448778	H1-hESC	embryonic stem cell:	n/a	chr15:72448539-72448558
41	RFX5	chr15:72448153-72448625	GM12878	blood:	n/a	n/a
42	RAD21	chr15:72448177-72448793	GM12878	blood:	n/a	chr15:72448539-72448558
43	CTCF	chr15:72448314-72448760	A549	lung:	n/a	chr15:72448543-72448556 chr15:72448541-72448559
44	CTCF	chr15:72448298-72448790	K562	blood:	n/a	chr15:72448543-72448556 chr15:72448541-72448559
45	MAX	chr15:72448151-72448709	A549	lung:	n/a	n/a
46	TEAD4	chr15:72447161-72448341	ECC-1	luminal epithelium:	n/a	n/a
47	CTCF	chr15:72446967-72449247	A549	lung:	n/a	chr15:72448543-72448556 chr15:72448541-72448559
48	RAD21	chr15:72448253-72448735	HepG2	liver:	n/a	chr15:72448539-72448558
49	SIN3AK20	chr15:72448304-72448688	A549	lung:	n/a	n/a
50	CTCF	chr15:72448267-72448829	H1-hESC	embryonic stem cell:	n/a	chr15:72448543-72448556 chr15:72448541-72448559

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr15:72448319-72448369	GM19239	blood:	n/a
2	chr15:72448319-72448369	Caco-2	colon:	n/a
3	chr15:72448319-72448369	HRPEpiC	eye:	n/a
4	chr15:72448319-72448369	MCF-7	breast:	n/a
5	chr15:72448319-72448369	HRCEpiC	kidney:	n/a
6	chr15:72448319-72448369	ECC-1	luminal epithelium:	n/a
7	chr15:72448319-72448369	AG10803	skin:	n/a
8	chr15:72448319-72448369	SK-N-SH	brain:	n/a
9	chr15:72448319-72448369	HRE	kidney:	n/a
10	chr15:72448319-72448369	HIPEpiC	eye:	n/a
11	chr15:72448319-72448369	GM12878	blood:	n/a
12	chr15:72448319-72448369	HCF	heart:	n/a
13	chr15:72448319-72448369	Hepatocyte	liver:	n/a
14	chr15:72448319-72448369	NB4	blood:	n/a
15	chr15:72448319-72448369	NHDF-neo	bronchial:	n/a
16	chr15:72448319-72448369	NT2-D1	testis:	n/a
17	chr15:72448319-72448369	H1-hESC	embryonic stem cell:	embryo
18	chr15:72448319-72448369	SK-N-MC	brain:	n/a
19	chr15:72448319-72448369	GM12892	blood:	n/a
20	chr15:72448319-72448369	HEEpiC	esophagus:	n/a
21	chr15:72448319-72448369	PrEC	prostate:	n/a
22	chr15:72448319-72448369	SK-N-SH_RA	brain:	n/a
23	chr15:72448319-72448369	AG04449	skin:	fetal
24	chr15:72448319-72448369	AoSMC	blood vessel:	n/a
25	chr15:72448319-72448369	SAEC	small airway:	n/a
26	chr15:72448319-72448369	HPAEpiC	pulmonary alveolar:	n/a
27	chr15:72448319-72448369	HL-60	blood:	n/a
28	chr15:72448319-72448369	LNCaP	prostate:	n/a
29	chr15:72448319-72448369	NHBE	bronchial:	n/a
30	chr15:72448319-72448369	BE2_C	brain:	n/a
31	chr15:72448319-72448369	IMR90	lung:	fetal
32	chr15:72448319-72448369	CMK	blood:	n/a
33	chr15:72448319-72448369	ovcar-3	ovarian:	n/a
34	chr15:72448319-72448369	ProgFib	skin:	n/a
35	chr15:72448319-72448369	PANC-1	pancreas:	n/a
36	chr15:72448319-72448369	PFSK-1	brain:	n/a
37	chr15:72448319-72448369	T-47D	breast:	n/a
38	chr15:72448319-72448369	HCM	heart:	n/a
39	chr15:72448319-72448369	HAEpiC	amniotic membrane:	n/a
40	chr15:72448319-72448369	GM06990	blood:	n/a
41	chr15:72448319-72448369	K562	blood:	n/a
42	chr15:72448319-72448369	MCF10A-Er-Src	breast:	n/a
43	chr15:72448319-72448369	HMEC	breast:	n/a
44	chr15:72448319-72448369	HEK293	kidney:	embryo
45	chr15:72448319-72448369	HepG2	liver:	n/a
46	chr15:72448319-72448369	Hela-S3	cervix:	n/a
47	chr15:72448319-72448369	HNPCEpiC	eye:	n/a
48	chr15:72448319-72448369	HUVEC	blood vessel:	n/a
49	chr15:72448319-72448369	AG09319	gingival:	n/a
50	chr15:72448319-72448369	Jurkat	blood:	n/a

No.	Distal block	Cell Line	Cell type
1	chr15:72036231..72036865-chr15:72448122..72448795,2	K562	blood:
2	chr15:72093395..72094147-chr15:72448020..72448826,2	K562	blood:
3	chr15:72095167..72095784-chr15:72448077..72448830,3	MCF-7	breast:
4	chr15:72076704..72077706-chr15:72447990..72448967,6	K562	blood:
5	chr15:72445875..72448342-chr15:72461656..72463455,2	MCF-7	breast:
6	chr15:72045149..72045729-chr15:72448063..72448589,2	K562	blood:
7	chr15:72094781..72095719-chr15:72448020..72449479,6	K562	blood:
8	chr15:72045078..72045591-chr15:72448055..72448912,2	MCF-7	breast:
9	chr15:72094281..72095669-chr15:72448048..72449003,4	MCF-7	breast:
10	chr15:72072426..72073273-chr15:72448126..72448905,3	MCF-7	breast:
11	chr15:72378259..72378845-chr15:72448189..72448926,2	MCF-7	breast:
12	chr15:72035950..72036579-chr15:72447850..72448622,2	MCF-7	breast:

Variant related genes	Relation type
ENSG00000260173	TF binding region
ENSG00000260173	CpG island
ENSG00000175318	Chromatin interaction

Extended variants
information (count: 111 )
Associated
traits (count: 1 )

rSNPs within LD-proxies of this variant (count:105)

rs_ID	r²[population]
rs1037680	0.92[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs10518979	0.94[AMR][1000 genomes];0.85[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs1074330	0.91[AMR][1000 genomes];0.85[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs11072338	0.85[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs11072339	0.88[AMR][1000 genomes];0.85[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs11072346	0.94[AMR][1000 genomes];0.89[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs11072351	0.86[ASN][1000 genomes]
rs11852789	0.94[AMR][1000 genomes];0.85[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs11853101	0.94[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs11853268	0.84[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs11858015	0.84[AFR][1000 genomes];0.83[AMR][1000 genomes];0.95[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs12050895	0.90[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs12439900	0.88[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs12442886	0.81[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs12591313	0.84[AFR][1000 genomes];0.94[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs12591338	0.84[AFR][1000 genomes];0.94[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs12591426	0.94[AMR][1000 genomes];0.94[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs12592044	0.91[AMR][1000 genomes];0.94[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs12592364	0.94[AMR][1000 genomes];0.85[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs12593134	0.91[AMR][1000 genomes];0.85[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs12593908	0.94[AMR][1000 genomes];0.87[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs12595228	0.94[AMR][1000 genomes];0.85[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs12595464	0.91[AMR][1000 genomes];0.85[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs12898585	0.86[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs12901580	0.89[AMR][1000 genomes];0.87[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs12901886	0.94[AMR][1000 genomes];0.91[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs12902006	0.91[AMR][1000 genomes];0.85[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs12902661	0.92[AMR][1000 genomes];0.93[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs12903484	0.85[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs12904652	0.82[EUR][1000 genomes]
rs12906711	0.82[AMR][1000 genomes];0.85[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs12908300	0.85[EUR][1000 genomes]
rs12908882	1.00[AMR][1000 genomes];0.90[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12911154	0.82[AMR][1000 genomes];0.85[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs12913042	0.84[ASN][1000 genomes]
rs12914070	0.91[AMR][1000 genomes];0.87[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs12916694	0.91[AMR][1000 genomes];0.85[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs12916951	0.85[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs12917428	0.82[AMR][1000 genomes];0.84[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs1384007	0.80[AMR][1000 genomes];0.85[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs16953769	0.95[AMR][1000 genomes];1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs16956381	0.85[ASN][1000 genomes]
rs16956444	0.85[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs16956452	0.94[AMR][1000 genomes];0.85[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs16956634	0.84[AFR][1000 genomes];0.83[AMR][1000 genomes];0.95[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs2035379	0.91[AMR][1000 genomes];0.85[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs2200056	0.91[AMR][1000 genomes];0.85[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs2279283	0.84[AMR][1000 genomes];0.82[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs2306488	0.91[AMR][1000 genomes];0.85[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs2306490	0.82[AMR][1000 genomes];0.85[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs2415130	0.84[AMR][1000 genomes]
rs2607090	0.94[AMR][1000 genomes];0.93[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs2856929	0.92[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs2899773	0.81[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs2912231	0.87[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs34085279	0.80[ASN][1000 genomes]
rs34137768	0.92[AMR][1000 genomes];0.84[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs34189331	0.83[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs34487006	0.95[AMR][1000 genomes];0.96[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs35115747	0.91[AMR][1000 genomes];0.85[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs35167572	0.91[AMR][1000 genomes];0.88[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs35186252	0.91[AMR][1000 genomes];0.90[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs35206011	0.96[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs35258998	0.86[AMR][1000 genomes];0.93[ASN][1000 genomes]
rs35673773	0.94[AMR][1000 genomes];0.90[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs35713471	0.95[AMR][1000 genomes];0.96[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs3743224	0.94[AMR][1000 genomes];0.98[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs3803471	0.93[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs4131630	0.91[AMR][1000 genomes];0.88[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs4238449	0.94[AMR][1000 genomes];0.92[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs4411469	0.94[AMR][1000 genomes];0.91[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs4445848	0.89[AMR][1000 genomes];0.88[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs4776581	0.82[AMR][1000 genomes];0.85[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs4776584	0.91[AMR][1000 genomes];0.85[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs4776586	0.97[AMR][1000 genomes];0.95[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs4776589	0.85[ASN][1000 genomes]
rs4777471	0.80[AMR][1000 genomes];0.84[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs4777474	0.84[ASN][1000 genomes]
rs4777477	0.94[AMR][1000 genomes];0.85[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs4777478	0.94[AMR][1000 genomes];0.85[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs4777480	0.87[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs4777484	0.91[AMR][1000 genomes];0.88[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs4777485	0.80[AMR][1000 genomes]
rs4777489	0.97[AMR][1000 genomes];0.88[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs55854204	0.97[AMR][1000 genomes];0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs60921026	0.95[ASN][1000 genomes]
rs62025574	0.82[AMR][1000 genomes];0.84[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs713048	0.87[EUR][1000 genomes]
rs71395051	0.83[AMR][1000 genomes];0.84[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs7169264	0.82[EUR][1000 genomes]
rs7170461	0.82[AMR][1000 genomes];0.84[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs7170754	0.82[AMR][1000 genomes];0.84[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs7172309	0.91[AMR][1000 genomes];0.88[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs7182776	0.91[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs7183196	0.87[EUR][1000 genomes]
rs7183749	0.91[AMR][1000 genomes];0.88[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs72733369	0.94[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs8023703	0.85[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs8025504	0.85[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs8028532	0.91[AMR][1000 genomes];0.88[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs8032038	0.91[AMR][1000 genomes];0.85[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs8182011	0.80[AMR][1000 genomes]
rs8192364	0.94[AMR][1000 genomes];0.92[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs8192386	0.94[AMR][1000 genomes];0.96[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs8192431	0.80[AFR][1000 genomes];0.97[AMR][1000 genomes];0.97[EUR][1000 genomes];0.88[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:6 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1042740	chr15:72128799-72482239	Weak transcription Enhancers Strong transcription Flanking Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh ZNF genes & repeats Active TSS Genic enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	30 gene(s)	inside rSNPs	diseases
2	nsv542426	chr15:72128799-72482239	Flanking Active TSS Strong transcription Weak transcription Enhancers Genic enhancers Flanking Bivalent TSS/Enh ZNF genes & repeats Active TSS Bivalent Enhancer Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	30 gene(s)	inside rSNPs	diseases
3	nsv431395	chr15:72266174-72701777	Strong transcription Enhancers Weak transcription Flanking Active TSS Active TSS Bivalent Enhancer ZNF genes & repeats Genic enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	144 gene(s)	inside rSNPs	diseases
4	nsv833051	chr15:72315471-72508429	Weak transcription Strong transcription Bivalent Enhancer ZNF genes & repeats Enhancers Transcr. at gene 5' and 3' Flanking Active TSS Active TSS Flanking Bivalent TSS/Enh Genic enhancers Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	31 gene(s)	inside rSNPs	diseases
5	nsv530817	chr15:72350885-72773374	Weak transcription Enhancers Flanking Active TSS Strong transcription Active TSS Genic enhancers Bivalent Enhancer Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	173 gene(s)	inside rSNPs	diseases
6	esv3430860	chr15:72373723-72849907	Weak transcription ZNF genes & repeats Flanking Active TSS Enhancers Active TSS Genic enhancers Bivalent Enhancer Strong transcription Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	172 gene(s)	inside rSNPs	diseases

mRNA abundance (count:1)

SNP	Gene	Cis/trans	Tissue	Source
rs35112434	MYO9A	Cis_1M	lymphoblastoid	RTeQTL

Chromatin state (count:117 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr15:72447200-72448800	Flanking Active TSS	A549	lung
2	chr15:72447400-72448600	Flanking Active TSS	Ganglion Eminence derived primary cultured neurospheres	brain
3	chr15:72447400-72448600	Flanking Active TSS	Adipose Nuclei	Adipose
4	chr15:72447400-72448600	Flanking Active TSS	Liver	Liver
5	chr15:72447400-72448600	Active TSS	Pancreatic Islets	Pancreatic Islet
6	chr15:72447400-72448600	Flanking Active TSS	Skeletal Muscle Female	skeletal muscle
7	chr15:72447400-72448800	Flanking Active TSS	HMEC	breast
8	chr15:72447400-72449000	Flanking Active TSS	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
9	chr15:72447400-72449000	Active TSS	Colonic Mucosa	Colon
10	chr15:72447400-72449000	Flanking Active TSS	Stomach Smooth Muscle	stomach
11	chr15:72447400-72449200	Active TSS	Fetal Kidney	kidney
12	chr15:72447600-72448400	Flanking Active TSS	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
13	chr15:72447600-72448400	Flanking Active TSS	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
14	chr15:72447600-72448400	Flanking Active TSS	Primary hematopoietic stem cells G-CSF-mobilized Female	--
15	chr15:72447600-72448400	Flanking Active TSS	Foreskin Keratinocyte Primary Cells skin03	Skin
16	chr15:72447600-72448400	Flanking Active TSS	Brain Germinal Matrix	brain
17	chr15:72447600-72448400	Flanking Active TSS	HSMMtube	muscle
18	chr15:72447600-72448400	Flanking Active TSS	NH-A	brain
19	chr15:72447600-72448600	Enhancers	ES-UCSF4 Cell Line	embryonic stem cell
20	chr15:72447600-72448600	Active TSS	Breast Myoepithelial Primary Cells	Breast
21	chr15:72447600-72448600	Flanking Active TSS	Primary hematopoietic stem cells G-CSF-mobilized Male	--
22	chr15:72447600-72448600	Flanking Active TSS	Muscle Satellite Cultured Cells	--
23	chr15:72447600-72448600	Flanking Active TSS	Cortex derived primary cultured neurospheres	brain
24	chr15:72447600-72448600	Flanking Active TSS	Foreskin Melanocyte Primary Cells skin03	Skin
25	chr15:72447600-72448600	Active TSS	Colon Smooth Muscle	Colon
26	chr15:72447600-72448600	Active TSS	Fetal Brain Female	brain
27	chr15:72447600-72448600	Flanking Active TSS	Fetal Muscle Trunk	muscle
28	chr15:72447600-72448600	Active TSS	Gastric	stomach
29	chr15:72447600-72448600	Active TSS	Rectal Mucosa Donor 31	rectum
30	chr15:72447600-72448600	Active TSS	Right Atrium	heart
31	chr15:72447600-72448600	Flanking Active TSS	Skeletal Muscle Male	skeletal muscle
32	chr15:72447600-72448600	Active TSS	NHDF-Ad	bronchial
33	chr15:72447600-72448600	Flanking Active TSS	NHEK	skin
34	chr15:72447600-72448800	Enhancers	iPS DF 6.9 Cell Line	embryonic stem cell
35	chr15:72447600-72448800	Enhancers	iPS DF 19.11 Cell Line	embryonic stem cell
36	chr15:72447600-72448800	Flanking Active TSS	Foreskin Fibroblast Primary Cells skin01	Skin
37	chr15:72447600-72448800	Flanking Active TSS	Foreskin Fibroblast Primary Cells skin02	Skin
38	chr15:72447600-72449000	Flanking Active TSS	Monocytes-CD14+_RO01746	blood
39	chr15:72447800-72448400	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
40	chr15:72447800-72448400	Flanking Active TSS	IMR90 fetal lung fibroblasts Cell Line	lung
41	chr15:72447800-72448400	Flanking Active TSS	Fetal Intestine Large	intestine
42	chr15:72447800-72448400	Flanking Active TSS	HSMM	muscle
43	chr15:72447800-72448400	Flanking Active TSS	NHLF	lung
44	chr15:72447800-72448600	Active TSS	Aorta	Aorta
45	chr15:72447800-72448600	Active TSS	Brain Substantia Nigra	brain
46	chr15:72447800-72448600	Flanking Active TSS	Fetal Brain Male	brain
47	chr15:72447800-72448600	Active TSS	Left Ventricle	heart
48	chr15:72447800-72448600	Active TSS	Lung	lung
49	chr15:72447800-72448600	Active TSS	Ovary	ovary
50	chr15:72447800-72448600	Active TSS	Psoas Muscle	Psoas

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