Variant report

Variant rs12901886
Chromosome Location chr15:72408069-72408070
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:73 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr15:72375000-72408200 Weak transcription Primary B cells from cord blood blood
2 chr15:72395800-72409000 Weak transcription Sigmoid Colon Sigmoid Colon
3 chr15:72395800-72409200 Weak transcription Gastric stomach
4 chr15:72396400-72408800 Weak transcription Right Ventricle heart
5 chr15:72396600-72408200 Weak transcription Primary hematopoietic stem cells short term culture blood
6 chr15:72397800-72408200 Weak transcription Brain Angular Gyrus brain
7 chr15:72397800-72408200 Weak transcription Duodenum Smooth Muscle Duodenum
8 chr15:72399800-72408800 Weak transcription ES-I3 Cell Line embryonic stem cell
9 chr15:72401600-72409200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
10 chr15:72404000-72408400 Enhancers Breast Myoepithelial Primary Cells Breast
11 chr15:72404000-72408600 Enhancers Skeletal Muscle Male skeletal muscle
12 chr15:72404200-72408200 Enhancers Fetal Lung lung
13 chr15:72404200-72408800 Enhancers Colon Smooth Muscle Colon
14 chr15:72405200-72408200 Weak transcription Primary mononuclear cells fromperipheralblood Blood
15 chr15:72405400-72408600 Enhancers Skeletal Muscle Female skeletal muscle
16 chr15:72405800-72408200 Enhancers NHDF-Ad bronchial
17 chr15:72405800-72408800 Active TSS GM12878-XiMat blood
18 chr15:72406000-72408400 Enhancers Brain Anterior Caudate brain
19 chr15:72406000-72408800 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
20 chr15:72406200-72408800 Weak transcription HSMM muscle
21 chr15:72406400-72408200 Weak transcription Primary T helper cells fromperipheralblood blood
22 chr15:72406400-72408200 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
23 chr15:72406400-72408400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
24 chr15:72406400-72408600 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
25 chr15:72406400-72408600 Weak transcription Cortex derived primary cultured neurospheres brain
26 chr15:72406600-72409200 Weak transcription Stomach Mucosa stomach
27 chr15:72406800-72408200 Weak transcription Pancreatic Islets Pancreatic Islet
28 chr15:72406800-72408400 Weak transcription Osteobl bone
29 chr15:72406800-72408800 Enhancers Primary T helper cells PMA-I stimulated --
30 chr15:72406800-72408800 Weak transcription Brain Substantia Nigra brain
31 chr15:72406800-72408800 Weak transcription Ovary ovary
32 chr15:72407000-72408200 Weak transcription Fetal Muscle Leg muscle
33 chr15:72407000-72408800 Weak transcription Liver Liver
34 chr15:72407200-72408200 Weak transcription A549 lung
35 chr15:72407400-72408200 Weak transcription Fetal Heart heart
36 chr15:72407600-72408400 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
37 chr15:72407600-72408400 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
38 chr15:72407600-72408400 Enhancers Brain Germinal Matrix brain
39 chr15:72407600-72408400 Enhancers Fetal Brain Female brain
40 chr15:72407600-72408600 Enhancers H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
41 chr15:72407600-72408600 Enhancers Brain Cingulate Gyrus brain
42 chr15:72407600-72408600 Enhancers Fetal Brain Male brain
43 chr15:72407600-72408600 Enhancers Hela-S3 cervix
44 chr15:72407600-72408600 Enhancers NHEK skin
45 chr15:72407600-72408800 Enhancers Dnd41 blood
46 chr15:72407600-72408800 Enhancers HepG2 liver
47 chr15:72407600-72409000 Enhancers Primary T helper naive cells from peripheral blood blood
48 chr15:72407600-72409000 Flanking Active TSS Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
49 chr15:72407600-72411000 Active TSS Stomach Smooth Muscle stomach
50 chr15:72407800-72408200 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived

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