Variant report

Variant rs12442886
Chromosome Location chr15:72473611-72473612
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:35 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr15:72465000-72476200 Enhancers Breast Myoepithelial Primary Cells Breast
2 chr15:72466800-72476200 Weak transcription Esophagus oesophagus
3 chr15:72468000-72476000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
4 chr15:72468400-72476000 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
5 chr15:72469000-72475000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
6 chr15:72471200-72473800 Enhancers Ganglion Eminence derived primary cultured neurospheres brain
7 chr15:72471200-72474200 Enhancers Cortex derived primary cultured neurospheres brain
8 chr15:72471200-72474400 Enhancers Brain Anterior Caudate brain
9 chr15:72471400-72473800 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
10 chr15:72471800-72476200 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
11 chr15:72472000-72474200 Weak transcription A549 lung
12 chr15:72472000-72476200 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
13 chr15:72472200-72475800 Enhancers Foreskin Melanocyte Primary Cells skin01 Skin
14 chr15:72472200-72476200 Enhancers Placenta Placenta
15 chr15:72472400-72475200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
16 chr15:72472400-72476000 Weak transcription HMEC breast
17 chr15:72472400-72476200 Weak transcription Gastric stomach
18 chr15:72472400-72476200 Weak transcription Left Ventricle heart
19 chr15:72472400-72476200 Weak transcription Pancreas Pancrea
20 chr15:72472600-72475200 Weak transcription Spleen Spleen
21 chr15:72472600-72476200 Weak transcription Right Ventricle heart
22 chr15:72472800-72476200 Weak transcription Placenta Amnion Placenta Amnion
23 chr15:72473000-72476200 Weak transcription Lung lung
24 chr15:72473200-72476000 Enhancers Hela-S3 cervix
25 chr15:72473200-72476200 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
26 chr15:72473200-72476200 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
27 chr15:72473400-72476000 Enhancers HepG2 liver
28 chr15:72473400-72476200 Weak transcription Brain Angular Gyrus brain
29 chr15:72473400-72476200 Weak transcription Brain Inferior Temporal Lobe brain
30 chr15:72473600-72473800 Bivalent Enhancer H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
31 chr15:72473600-72473800 Flanking Active TSS Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
32 chr15:72473600-72475200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
33 chr15:72473600-72476000 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
34 chr15:72473600-72476000 Weak transcription Brain Substantia Nigra brain
35 chr15:72473600-72476200 Weak transcription Brain Hippocampus Middle brain

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