The 2.0 version of rSNPBase

Variant report

Variant rs35123448
Chromosome Location chr2:173089209-173089210
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:36 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:173079800-173092000 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
2 chr2:173082200-173090600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
3 chr2:173082200-173090600 Weak transcription HMEC breast
4 chr2:173082200-173092000 Weak transcription Esophagus oesophagus
5 chr2:173083200-173092400 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
6 chr2:173086000-173091200 Enhancers Primary T helper naive cells fromperipheralblood blood
7 chr2:173086200-173090000 Weak transcription Fetal Adrenal Gland Adrenal Gland
8 chr2:173086200-173091000 Enhancers Primary T killer memory cells from peripheral blood blood
9 chr2:173087000-173091200 Enhancers Primary T helper 17 cells PMA-I stimulated --
10 chr2:173087200-173091400 Enhancers Primary T helper cells PMA-I stimulated --
11 chr2:173087400-173091000 Enhancers Primary T cells from cord blood blood
12 chr2:173087400-173091200 Enhancers Primary T helper memory cells from peripheral blood 2 blood
13 chr2:173087400-173091200 Enhancers Primary T helper cells fromperipheralblood blood
14 chr2:173087600-173089400 Enhancers Primary T regulatory cells fromperipheralblood blood
15 chr2:173087600-173091200 Enhancers Primary T helper memory cells from peripheral blood 1 blood
16 chr2:173087600-173091200 Enhancers Primary T cells effector/memory enriched fromperipheralblood blood
17 chr2:173087800-173091200 Enhancers Rectal Mucosa Donor 31 rectum
18 chr2:173087800-173098000 Enhancers Fetal Intestine Small intestine
19 chr2:173087800-173098800 Enhancers Fetal Intestine Large intestine
20 chr2:173088200-173090200 Weak transcription Colonic Mucosa Colon
21 chr2:173088600-173089800 Weak transcription Gastric stomach
22 chr2:173088600-173095400 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
23 chr2:173088800-173089800 Weak transcription Primary hematopoietic stem cells short term culture blood
24 chr2:173088800-173089800 Weak transcription Duodenum Mucosa Duodenum
25 chr2:173088800-173090000 Weak transcription Primary hematopoietic stem cells blood
26 chr2:173088800-173090400 Weak transcription Primary T killer naive cells fromperipheralblood blood
27 chr2:173088800-173090600 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
28 chr2:173088800-173090600 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
29 chr2:173088800-173090600 Weak transcription Thymus Thymus
30 chr2:173088800-173090600 Weak transcription NHEK skin
31 chr2:173089000-173089400 Weak transcription Stomach Mucosa stomach
32 chr2:173089000-173090200 Weak transcription Breast Myoepithelial Primary Cells Breast
33 chr2:173089000-173090600 Weak transcription Primary T helper naive cells from peripheral blood blood
34 chr2:173089000-173092000 Weak transcription Fetal Thymus thymus
35 chr2:173089200-173089600 Weak transcription Primary T cells fromperipheralblood blood
36 chr2:173089200-173089600 Enhancers Rectal Mucosa Donor 29 rectum

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Last update: Aug 31, 2015