The 2.0 version of rSNPBase

Variant report

Variant rs35830240
Chromosome Location chr1:10273916-10273917
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:112 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:10272000-10274200 Enhancers Small Intestine intestine
2 chr1:10272000-10275600 Weak transcription Primary T helper 17 cells PMA-I stimulated --
3 chr1:10272000-10275600 Weak transcription Primary T killer naive cells fromperipheralblood blood
4 chr1:10272200-10274000 Weak transcription Pancreas Pancrea
5 chr1:10272200-10274200 Enhancers Liver Liver
6 chr1:10272200-10274200 Enhancers Left Ventricle heart
7 chr1:10272200-10274200 Enhancers Ovary ovary
8 chr1:10272200-10275600 Weak transcription Primary T cells fromperipheralblood blood
9 chr1:10272200-10275600 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
10 chr1:10272200-10275800 Weak transcription Sigmoid Colon Sigmoid Colon
11 chr1:10272200-10276000 Weak transcription Primary T helper cells fromperipheralblood blood
12 chr1:10272200-10276000 Weak transcription Primary T regulatory cells fromperipheralblood blood
13 chr1:10272200-10276400 Weak transcription Primary B cells from peripheral blood blood
14 chr1:10272200-10276400 Weak transcription Primary hematopoietic stem cells blood
15 chr1:10272200-10276600 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
16 chr1:10272200-10276600 Weak transcription Spleen Spleen
17 chr1:10272200-10277600 Weak transcription Esophagus oesophagus
18 chr1:10272200-10278000 Weak transcription Colonic Mucosa Colon
19 chr1:10272200-10278200 Weak transcription Placenta Placenta
20 chr1:10272400-10274000 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
21 chr1:10272400-10274000 Enhancers Rectal Smooth Muscle rectum
22 chr1:10272400-10274200 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
23 chr1:10272400-10274200 Enhancers Adipose Nuclei Adipose
24 chr1:10272400-10274400 Enhancers Colon Smooth Muscle Colon
25 chr1:10272400-10274400 Enhancers Fetal Stomach stomach
26 chr1:10272400-10275600 Weak transcription ES-WA7 Cell Line embryonic stem cell
27 chr1:10272400-10276200 Weak transcription Primary monocytes fromperipheralblood blood
28 chr1:10272400-10276400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
29 chr1:10272600-10274000 Enhancers iPS-18 Cell Line embryonic stem cell
30 chr1:10272600-10274200 Enhancers hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
31 chr1:10272600-10274200 Enhancers Stomach Smooth Muscle stomach
32 chr1:10272600-10274200 Enhancers HUVEC blood vessel
33 chr1:10272600-10274200 Enhancers NH-A brain
34 chr1:10272600-10274200 Enhancers Osteobl bone
35 chr1:10272600-10274400 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
36 chr1:10272600-10274400 Enhancers Fetal Heart heart
37 chr1:10272600-10274400 Enhancers Fetal Lung lung
38 chr1:10272600-10274400 Enhancers Hela-S3 cervix
39 chr1:10272600-10274400 Enhancers NHLF lung
40 chr1:10272600-10274600 Enhancers Fetal Adrenal Gland Adrenal Gland
41 chr1:10272600-10275000 Enhancers Primary neutrophils fromperipheralblood blood
42 chr1:10272600-10275000 Enhancers Fetal Brain Male brain
43 chr1:10272600-10275600 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
44 chr1:10272600-10275600 Weak transcription Primary T helper cells PMA-I stimulated --
45 chr1:10272600-10275600 Weak transcription Aorta Aorta
46 chr1:10272600-10275800 Weak transcription Primary T killer memory cells from peripheral blood blood
47 chr1:10272600-10275800 Weak transcription A549 lung
48 chr1:10272600-10276000 Weak transcription Primary T helper naive cells from peripheral blood blood
49 chr1:10272600-10276000 Weak transcription Duodenum Mucosa Duodenum
50 chr1:10272600-10276200 Weak transcription Stomach Mucosa stomach

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Last update: Aug 31, 2015