Variant report

Variant	rs3753037
Chromosome Location	chr1:10355834-10355835
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr1:10270113..10272001-chr1:10355128..10356960,2	K562	blood:

Variant related genes	Relation type
ENSG00000054523	Chromatin interaction

Extended variants
information (count: 156 )
Associated
traits (count: 3 )

rSNPs within LD-proxies of this variant (count:151)

rs_ID	r²[population]
rs1002076	0.87[CEU][hapmap];0.83[CHD][hapmap];0.87[GIH][hapmap];0.86[TSI][hapmap]
rs10492969	0.83[CHD][hapmap]
rs10492971	0.80[CEU][hapmap];0.81[EUR][1000 genomes]
rs10492972	0.91[CEU][hapmap];0.83[CHD][hapmap];0.94[GIH][hapmap];0.84[MEX][hapmap];0.88[TSI][hapmap];0.82[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs1049887	0.87[EUR][1000 genomes]
rs11121531	0.86[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs11121532	0.89[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs11121533	0.89[AFR][1000 genomes];0.91[AMR][1000 genomes];0.95[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs11121537	0.84[EUR][1000 genomes]
rs11121544	0.94[AMR][1000 genomes];0.93[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs11121545	0.84[EUR][1000 genomes]
rs11121551	0.80[CEU][hapmap];0.83[CHD][hapmap];0.87[GIH][hapmap];0.84[MEX][hapmap];0.82[TSI][hapmap]
rs11121552	1.00[CEU][hapmap];0.83[CHB][hapmap];1.00[CHD][hapmap];0.94[GIH][hapmap];1.00[JPT][hapmap];0.95[MEX][hapmap];0.97[TSI][hapmap];0.88[EUR][1000 genomes]
rs11121557	0.83[CHD][hapmap]
rs11576459	0.81[EUR][1000 genomes]
rs11576654	0.88[EUR][1000 genomes]
rs11576866	0.95[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.94[AMR][1000 genomes];0.95[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs11578694	0.86[EUR][1000 genomes]
rs11578788	0.94[AMR][1000 genomes];0.95[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs11579365	0.80[CEU][hapmap];0.83[CHD][hapmap];0.87[GIH][hapmap];0.80[MEX][hapmap];0.82[TSI][hapmap]
rs11580789	0.81[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs11582123	0.91[CEU][hapmap];0.84[EUR][1000 genomes]
rs11584023	0.84[EUR][1000 genomes]
rs11585760	0.93[AMR][1000 genomes];0.95[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs11585794	0.87[CEU][hapmap]
rs11587309	0.91[CEU][hapmap];0.83[CHD][hapmap];0.87[GIH][hapmap];0.87[MEX][hapmap];0.86[TSI][hapmap]
rs11587495	0.91[CEU][hapmap]
rs12117765	0.81[EUR][1000 genomes]
rs12119477	0.95[AMR][1000 genomes];0.95[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs12120042	0.80[CEU][hapmap];0.83[CHD][hapmap];0.94[GIH][hapmap];0.84[MEX][hapmap];0.84[TSI][hapmap];0.82[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs12120191	0.80[CEU][hapmap];0.83[CHD][hapmap];0.94[GIH][hapmap];0.84[MEX][hapmap];0.84[TSI][hapmap];0.82[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs12122029	0.81[EUR][1000 genomes]
rs12125535	0.81[EUR][1000 genomes]
rs12127553	0.89[AFR][1000 genomes];0.91[AMR][1000 genomes];0.87[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs12127604	0.82[CEU][hapmap];0.82[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs12129035	0.81[AFR][1000 genomes];0.91[AMR][1000 genomes];0.89[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs12130220	1.00[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];1.00[LWK][hapmap];1.00[MEX][hapmap];1.00[MKK][hapmap];1.00[TSI][hapmap];1.00[YRI][hapmap];1.00[AFR][1000 genomes];0.98[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12130563	0.91[CEU][hapmap];0.83[EUR][1000 genomes]
rs12131441	0.91[CEU][hapmap];0.83[CHD][hapmap];0.89[GIH][hapmap];0.86[TSI][hapmap];0.83[EUR][1000 genomes]
rs12132134	0.81[AMR][1000 genomes]
rs12132635	0.85[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs12133125	0.82[ASN][1000 genomes]
rs12136376	1.00[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];1.00[LWK][hapmap];1.00[MEX][hapmap];1.00[MKK][hapmap];1.00[TSI][hapmap];1.00[YRI][hapmap];0.89[AFR][1000 genomes];0.89[AMR][1000 genomes];0.93[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs12137456	0.95[AFR][1000 genomes];0.93[AMR][1000 genomes];0.98[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs12137880	0.85[EUR][1000 genomes]
rs12141246	0.80[CEU][hapmap]
rs12141416	0.91[CEU][hapmap];0.83[CHD][hapmap];0.94[GIH][hapmap];0.84[MEX][hapmap];0.88[TSI][hapmap];0.89[EUR][1000 genomes]
rs12402052	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.92[AMR][1000 genomes];0.98[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs12403443	1.00[CHB][hapmap];1.00[CHD][hapmap];0.89[GIH][hapmap];1.00[JPT][hapmap];0.91[MEX][hapmap];0.90[TSI][hapmap];0.92[AMR][1000 genomes];0.86[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs12406776	0.89[AMR][1000 genomes];0.95[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs12407992	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.91[LWK][hapmap];1.00[MEX][hapmap];0.96[MKK][hapmap];1.00[TSI][hapmap];0.93[AMR][1000 genomes];0.98[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs12408019	0.92[AMR][1000 genomes];0.97[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs12409754	0.91[CEU][hapmap];0.83[CHD][hapmap];0.87[GIH][hapmap];0.84[MEX][hapmap];0.86[TSI][hapmap]
rs12409933	0.81[AMR][1000 genomes]
rs12722830	0.84[EUR][1000 genomes]
rs12733312	0.95[CEU][hapmap];0.80[JPT][hapmap]
rs12734068	0.93[AMR][1000 genomes];0.92[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs12734551	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];0.92[GIH][hapmap];1.00[JPT][hapmap];0.95[MEX][hapmap];0.97[TSI][hapmap];0.94[AMR][1000 genomes];0.94[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs12737239	0.91[CEU][hapmap]
rs12751375	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap]
rs12753426	0.81[AMR][1000 genomes]
rs12755094	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.93[AMR][1000 genomes];0.98[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs12755363	0.82[EUR][1000 genomes]
rs12757288	0.80[CEU][hapmap]
rs1339458	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];1.00[MEX][hapmap];1.00[TSI][hapmap];0.93[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs1467653	0.83[CHD][hapmap]
rs1536262	0.83[CHD][hapmap]
rs1536263	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.94[AMR][1000 genomes];0.92[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs1538557	0.80[CEU][hapmap];0.83[CHD][hapmap];0.94[GIH][hapmap];0.84[MEX][hapmap];0.84[TSI][hapmap]
rs1555849	0.91[CEU][hapmap];0.83[CHD][hapmap];0.87[GIH][hapmap];0.84[MEX][hapmap];0.86[TSI][hapmap];0.84[EUR][1000 genomes]
rs1556916	0.80[CEU][hapmap];0.83[CHD][hapmap];0.87[GIH][hapmap];0.84[MEX][hapmap];0.82[TSI][hapmap]
rs1556917	0.80[CEU][hapmap];0.83[CHD][hapmap];0.87[GIH][hapmap]
rs17034643	0.80[CEU][hapmap];0.83[CHD][hapmap];0.94[GIH][hapmap];0.84[MEX][hapmap];0.84[TSI][hapmap];0.82[EUR][1000 genomes]
rs17034821	0.91[CEU][hapmap];0.83[CHD][hapmap];0.87[GIH][hapmap];0.84[MEX][hapmap];0.86[TSI][hapmap];0.84[EUR][1000 genomes]
rs17396382	0.95[CEU][hapmap];0.82[EUR][1000 genomes]
rs17400510	1.00[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];1.00[LWK][hapmap];1.00[MEX][hapmap];1.00[MKK][hapmap];1.00[TSI][hapmap];1.00[YRI][hapmap];0.89[AFR][1000 genomes];0.88[AMR][1000 genomes];0.95[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs17401924	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];0.92[GIH][hapmap];1.00[JPT][hapmap];0.95[MEX][hapmap];0.97[TSI][hapmap];0.94[AMR][1000 genomes];0.96[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs17401966	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];0.92[GIH][hapmap];1.00[JPT][hapmap];0.95[MEX][hapmap];0.97[TSI][hapmap];0.94[AMR][1000 genomes];0.96[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs17410217	0.91[CEU][hapmap];0.83[CHD][hapmap];0.87[GIH][hapmap];0.87[MEX][hapmap];0.87[MKK][hapmap];0.85[TSI][hapmap];0.81[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs17410793	0.94[AMR][1000 genomes];0.95[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs17411502	1.00[CEU][hapmap];0.94[CHB][hapmap];1.00[CHD][hapmap];0.92[GIH][hapmap];1.00[JPT][hapmap];0.95[MEX][hapmap];0.97[TSI][hapmap];0.88[EUR][1000 genomes]
rs1889309	1.00[CEU][hapmap];0.89[CHB][hapmap];1.00[CHD][hapmap];0.92[GIH][hapmap];1.00[JPT][hapmap];0.95[MEX][hapmap];0.97[TSI][hapmap];0.82[EUR][1000 genomes]
rs2004034	0.94[AMR][1000 genomes];0.99[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs2039778	0.80[CEU][hapmap];0.83[CHD][hapmap];0.94[GIH][hapmap];0.84[MEX][hapmap];0.84[TSI][hapmap];0.82[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs2182326	0.80[CEU][hapmap];0.83[CHD][hapmap];0.87[GIH][hapmap];0.84[MEX][hapmap];0.82[TSI][hapmap]
rs2185252	0.91[CEU][hapmap];0.83[CHD][hapmap];0.87[GIH][hapmap];0.84[MEX][hapmap];0.86[TSI][hapmap];0.84[EUR][1000 genomes]
rs2275424	0.95[CEU][hapmap];0.94[CHB][hapmap];0.97[CHD][hapmap];1.00[GIH][hapmap];0.94[JPT][hapmap];0.87[MEX][hapmap];0.97[TSI][hapmap];0.96[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2276100	0.84[EUR][1000 genomes]
rs34215045	0.94[AMR][1000 genomes];0.98[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs34225619	0.92[AFR][1000 genomes];0.96[AMR][1000 genomes];0.95[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs35187325	0.82[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs35388505	0.81[EUR][1000 genomes]
rs35766535	0.85[AMR][1000 genomes];0.93[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs35830240	0.82[ASN][1000 genomes]
rs35837142	0.92[AMR][1000 genomes];0.99[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs35850116	0.84[EUR][1000 genomes]
rs3737155	0.91[CEU][hapmap];0.83[CHD][hapmap];0.87[GIH][hapmap];0.84[MEX][hapmap];0.86[TSI][hapmap]
rs3748577	0.91[CEU][hapmap];0.83[CHD][hapmap];0.94[GIH][hapmap];0.84[MEX][hapmap];0.88[TSI][hapmap];0.82[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs3748578	1.00[CEU][hapmap];0.94[CHB][hapmap];1.00[CHD][hapmap];0.92[GIH][hapmap];1.00[JPT][hapmap];0.81[LWK][hapmap];0.96[MEX][hapmap];0.82[MKK][hapmap];0.97[TSI][hapmap];0.95[AMR][1000 genomes];0.95[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs3748579	0.84[EUR][1000 genomes]
rs3748581	0.83[CHD][hapmap]
rs4240911	0.91[CEU][hapmap];0.83[CHD][hapmap];0.94[GIH][hapmap];0.84[MEX][hapmap];0.86[TSI][hapmap];0.86[EUR][1000 genomes]
rs4259656	0.92[AMR][1000 genomes];0.96[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs4333852	0.80[CEU][hapmap];0.83[CHD][hapmap];0.87[GIH][hapmap];0.84[MEX][hapmap];0.82[TSI][hapmap]
rs4348727	1.00[CEU][hapmap];0.94[CHB][hapmap];0.97[CHD][hapmap];1.00[GIH][hapmap];0.94[JPT][hapmap];0.91[MEX][hapmap];0.81[MKK][hapmap];0.97[TSI][hapmap]
rs4475756	0.80[CEU][hapmap];0.83[CHD][hapmap];0.87[GIH][hapmap];0.84[MEX][hapmap];0.82[TSI][hapmap]
rs4529713	0.80[CEU][hapmap];0.83[CHD][hapmap];0.94[GIH][hapmap];0.84[MEX][hapmap];0.84[TSI][hapmap]
rs4623	0.82[EUR][1000 genomes]
rs4845931	0.82[EUR][1000 genomes]
rs4845932	0.81[AMR][1000 genomes]
rs4845933	0.94[AMR][1000 genomes];0.98[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs4845934	0.83[EUR][1000 genomes]
rs4846197	0.80[CEU][hapmap];0.83[CHD][hapmap];0.94[GIH][hapmap];0.83[MEX][hapmap];0.84[TSI][hapmap]
rs4846205	0.86[EUR][1000 genomes]
rs4846208	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.95[MEX][hapmap];1.00[TSI][hapmap];0.89[AMR][1000 genomes];0.98[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs4846209	0.80[CEU][hapmap];0.83[CHD][hapmap];0.94[GIH][hapmap];0.84[MEX][hapmap];0.82[TSI][hapmap];0.80[EUR][1000 genomes]
rs4846210	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.95[MEX][hapmap];1.00[TSI][hapmap];0.92[AMR][1000 genomes];0.99[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs4846212	0.80[CEU][hapmap];0.83[CHD][hapmap];0.87[GIH][hapmap];0.87[MEX][hapmap];0.87[MKK][hapmap];0.84[TSI][hapmap];0.81[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs4846213	0.84[EUR][1000 genomes]
rs4846216	0.83[CHD][hapmap]
rs4846219	0.83[CHD][hapmap]
rs4846221	0.83[CHD][hapmap]
rs58053556	0.87[EUR][1000 genomes]
rs58549151	0.89[AMR][1000 genomes];0.98[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs58697740	0.94[AMR][1000 genomes];0.93[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs60743860	0.88[EUR][1000 genomes]
rs61778376	0.84[EUR][1000 genomes]
rs61778399	0.83[EUR][1000 genomes]
rs61778401	0.83[EUR][1000 genomes]
rs61778403	0.81[EUR][1000 genomes]
rs6541085	0.83[CHD][hapmap]
rs6541089	0.83[CEU][hapmap]
rs6674843	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];0.92[GIH][hapmap];1.00[JPT][hapmap];0.86[MEX][hapmap];0.95[TSI][hapmap];0.87[EUR][1000 genomes]
rs6682868	0.83[CHD][hapmap]
rs6700866	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.93[AMR][1000 genomes];0.96[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs746881	0.91[CEU][hapmap];0.83[CHD][hapmap];0.94[GIH][hapmap];0.84[MEX][hapmap];0.88[TSI][hapmap];0.82[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs7520651	1.00[AFR][1000 genomes];0.95[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs7520935	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];0.94[JPT][hapmap];1.00[MEX][hapmap];1.00[TSI][hapmap];0.98[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs7524693	0.81[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs7530167	0.88[EUR][1000 genomes]
rs7546368	0.83[CHD][hapmap]
rs7553228	0.80[CEU][hapmap];0.82[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs7553935	0.83[CHD][hapmap];0.87[GIH][hapmap];0.87[MEX][hapmap];0.85[MKK][hapmap]
rs8019	0.80[CEU][hapmap];0.83[CHD][hapmap];0.87[GIH][hapmap];0.82[TSI][hapmap]
rs912961	0.82[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs912962	0.83[CHD][hapmap]
rs912963	0.80[CEU][hapmap];0.83[CHD][hapmap];0.94[GIH][hapmap];0.80[MEX][hapmap];0.84[TSI][hapmap];0.82[EUR][1000 genomes]
rs9332414	0.80[CEU][hapmap];0.83[CHD][hapmap];0.94[GIH][hapmap];0.84[MEX][hapmap];0.84[TSI][hapmap];0.80[EUR][1000 genomes]
rs946501	0.80[CEU][hapmap];0.83[CHD][hapmap];0.94[GIH][hapmap];0.84[MEX][hapmap];0.84[TSI][hapmap]
rs946503	0.80[CEU][hapmap];0.83[CHD][hapmap];0.94[GIH][hapmap];0.80[MEX][hapmap];0.84[TSI][hapmap]
rs946504	0.83[CHD][hapmap]

Variant overlapped rSNPs/rCNVs (count:5 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv2757722	chr1:10238070-10582554	Weak transcription Enhancers Genic enhancers Active TSS Strong transcription Flanking Active TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent Enhancer ZNF genes & repeats Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	39 gene(s)	inside rSNPs	diseases
2	esv2758920	chr1:10238070-10582554	Strong transcription Weak transcription Flanking Active TSS Enhancers ZNF genes & repeats Active TSS Genic enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3' Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	39 gene(s)	inside rSNPs	diseases
3	nsv545381	chr1:10296452-10423988	Enhancers Genic enhancers Weak transcription Strong transcription Flanking Active TSS ZNF genes & repeats Active TSS Bivalent Enhancer Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	8 gene(s)	inside rSNPs	diseases
4	nsv817370	chr1:10305470-10697150	Weak transcription Flanking Active TSS Enhancers Strong transcription Transcr. at gene 5' and 3' Active TSS Genic enhancers ZNF genes & repeats Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	33 gene(s)	inside rSNPs	diseases
5	nsv545382	chr1:10309026-10377221	Strong transcription Enhancers Weak transcription Genic enhancers Flanking Active TSS Active TSS ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	5 gene(s)	inside rSNPs	diseases

mRNA abundance (count:3)

SNP	Gene	Cis/trans	Tissue	Source
rs3753037	KIF1B	cis	Thyroid	GTEx
rs3753037	PGD	cis	lymphoblastoid	seeQTL
rs3753037	KIF1B	cis	parietal	SCAN

Chromatin state (count:127 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:10272600-10368200	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
2	chr1:10314200-10356400	Weak transcription	Small Intestine	intestine
3	chr1:10314200-10363400	Weak transcription	Fetal Brain Male	brain
4	chr1:10315400-10373400	Strong transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
5	chr1:10316800-10380200	Weak transcription	ES-WA7 Cell Line	embryonic stem cell
6	chr1:10317400-10356400	Weak transcription	Primary T helper memory cells from peripheral blood 1	blood
7	chr1:10318400-10367600	Weak transcription	Primary T helper naive cells from peripheral blood	blood
8	chr1:10320600-10363000	Weak transcription	Gastric	stomach
9	chr1:10321400-10359000	Strong transcription	Monocytes-CD14+_RO01746	blood
10	chr1:10322400-10356400	Weak transcription	Esophagus	oesophagus
11	chr1:10322800-10363200	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
12	chr1:10324200-10356200	Weak transcription	Primary T killer memory cells from peripheral blood	blood
13	chr1:10324400-10356400	Weak transcription	Primary B cells from peripheral blood	blood
14	chr1:10331600-10368000	Weak transcription	Primary T helper naive cells fromperipheralblood	blood
15	chr1:10331800-10356400	Weak transcription	Fetal Thymus	thymus
16	chr1:10332200-10363800	Weak transcription	Thymus	Thymus
17	chr1:10333200-10359200	Weak transcription	Stomach Mucosa	stomach
18	chr1:10334400-10360000	Strong transcription	HUES64 Cell Line	embryonic stem cell
19	chr1:10335000-10360000	Strong transcription	HUES6 Cell Line	embryonic stem cell
20	chr1:10335600-10359000	Strong transcription	Fetal Muscle Trunk	muscle
21	chr1:10335800-10359000	Strong transcription	ES-UCSF4 Cell Line	embryonic stem cell
22	chr1:10340000-10356600	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
23	chr1:10342800-10356200	Weak transcription	Dnd41	blood
24	chr1:10343800-10356400	Weak transcription	H9 Cell Line	embryonic stem cell
25	chr1:10343800-10358800	Strong transcription	NHDF-Ad	bronchial
26	chr1:10344000-10359200	Weak transcription	GM12878-XiMat	blood
27	chr1:10344000-10363400	Weak transcription	K562	blood
28	chr1:10344400-10356600	Weak transcription	Colonic Mucosa	Colon
29	chr1:10345200-10359400	Strong transcription	iPS-20b Cell Line	embryonic stem cell
30	chr1:10345600-10361800	Weak transcription	iPS-15b Cell Line	embryonic stem cell
31	chr1:10346000-10358400	Strong transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
32	chr1:10347400-10356400	Weak transcription	Pancreatic Islets	Pancreatic Islet
33	chr1:10347400-10356600	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
34	chr1:10347400-10363200	Weak transcription	Pancreas	Pancrea
35	chr1:10347400-10365400	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
36	chr1:10347600-10357000	Weak transcription	Primary T cells from cord blood	blood
37	chr1:10347800-10366800	Strong transcription	HSMM	muscle
38	chr1:10348200-10367600	Weak transcription	Primary T killer naive cells fromperipheralblood	blood
39	chr1:10348400-10358600	Strong transcription	Fetal Lung	lung
40	chr1:10348400-10360000	Strong transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
41	chr1:10348600-10356200	Weak transcription	Aorta	Aorta
42	chr1:10348600-10359000	Strong transcription	Fetal Muscle Leg	muscle
43	chr1:10348800-10357000	Strong transcription	Primary monocytes fromperipheralblood	blood
44	chr1:10348800-10358800	Strong transcription	NH-A	brain
45	chr1:10348800-10360000	Strong transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
46	chr1:10349200-10358400	Strong transcription	Rectal Mucosa Donor 29	rectum
47	chr1:10349400-10357400	Strong transcription	Skeletal Muscle Male	skeletal muscle
48	chr1:10349600-10357800	Strong transcription	Skeletal Muscle Female	skeletal muscle
49	chr1:10349800-10360000	Strong transcription	Fetal Adrenal Gland	Adrenal Gland
50	chr1:10349800-10369400	Weak transcription	Right Atrium	heart

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