The 2.0 version of rSNPBase

Variant report

Variant rs12753426
Chromosome Location chr1:10372110-10372111
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:107 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:10315400-10373400 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
2 chr1:10316800-10380200 Weak transcription ES-WA7 Cell Line embryonic stem cell
3 chr1:10352600-10381800 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
4 chr1:10353200-10381800 Weak transcription Primary hematopoietic stem cells blood
5 chr1:10357400-10385600 Weak transcription Small Intestine intestine
6 chr1:10357600-10397000 Weak transcription Fetal Thymus thymus
7 chr1:10358000-10381800 Weak transcription Primary hematopoietic stem cells short term culture blood
8 chr1:10358600-10381800 Weak transcription Primary T cells from cord blood blood
9 chr1:10358800-10407000 Weak transcription Primary B cells from cord blood blood
10 chr1:10363000-10373200 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
11 chr1:10363000-10379800 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
12 chr1:10363600-10373400 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
13 chr1:10363800-10380000 Weak transcription A549 lung
14 chr1:10364200-10381800 Weak transcription Gastric stomach
15 chr1:10364200-10394600 Weak transcription Dnd41 blood
16 chr1:10364400-10380000 Weak transcription ES-I3 Cell Line embryonic stem cell
17 chr1:10364400-10384800 Weak transcription Primary T cells fromperipheralblood blood
18 chr1:10364600-10379600 Weak transcription iPS-15b Cell Line embryonic stem cell
19 chr1:10364600-10381800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
20 chr1:10364600-10381800 Weak transcription Esophagus oesophagus
21 chr1:10364600-10381800 Weak transcription Pancreas Pancrea
22 chr1:10364600-10382200 Weak transcription Colonic Mucosa Colon
23 chr1:10364600-10431000 Weak transcription Placenta Amnion Placenta Amnion
24 chr1:10364800-10381800 Weak transcription Fetal Intestine Small intestine
25 chr1:10364800-10381800 Weak transcription Fetal Stomach stomach
26 chr1:10364800-10381800 Weak transcription Spleen Spleen
27 chr1:10364800-10383800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
28 chr1:10364800-10386000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
29 chr1:10364800-10386000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
30 chr1:10364800-10386000 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
31 chr1:10364800-10386000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
32 chr1:10364800-10386000 Weak transcription Primary mononuclear cells fromperipheralblood Blood
33 chr1:10365000-10379600 Weak transcription H1 Cell Line embryonic stem cell
34 chr1:10365000-10381600 Weak transcription Rectal Mucosa Donor 31 rectum
35 chr1:10365000-10381800 Weak transcription Aorta Aorta
36 chr1:10365000-10381800 Weak transcription Sigmoid Colon Sigmoid Colon
37 chr1:10365000-10383800 Weak transcription Rectal Smooth Muscle rectum
38 chr1:10365000-10385800 Weak transcription NHEK skin
39 chr1:10365200-10398400 Weak transcription Fetal Heart heart
40 chr1:10365600-10382400 Weak transcription NHLF lung
41 chr1:10365600-10383800 Weak transcription HMEC breast
42 chr1:10365600-10385600 Weak transcription Hela-S3 cervix
43 chr1:10365800-10379800 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
44 chr1:10365800-10379800 Weak transcription Primary monocytes fromperipheralblood blood
45 chr1:10365800-10379800 Weak transcription Fetal Kidney kidney
46 chr1:10365800-10394800 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
47 chr1:10366000-10378000 Weak transcription HUES64 Cell Line embryonic stem cell
48 chr1:10366000-10378400 Weak transcription H9 Cell Line embryonic stem cell
49 chr1:10366000-10381800 Weak transcription Duodenum Smooth Muscle Duodenum
50 chr1:10366400-10378000 Weak transcription HUES48 Cell Line embryonic stem cell

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Last update: Aug 31, 2015