Variant report
| Variant | rs12136404 |
|---|---|
| Chromosome Location | chr1:10317879-10317880 |
| allele | A/G |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr1:10272600-10368200 | Weak transcription | H1 BMP4 Derived Mesendoderm Cultured Cells | ES cell derived |
| 2 | chr1:10277000-10322000 | Weak transcription | Spleen | Spleen |
| 3 | chr1:10293000-10322000 | Weak transcription | Primary T cells from cord blood | blood |
| 4 | chr1:10295800-10322000 | Weak transcription | Lung | lung |
| 5 | chr1:10302000-10321800 | Weak transcription | Esophagus | oesophagus |
| 6 | chr1:10307600-10340400 | Weak transcription | iPS DF 6.9 Cell Line | embryonic stem cell |
| 7 | chr1:10311000-10322000 | Weak transcription | Primary mononuclear cells fromperipheralblood | Blood |
| 8 | chr1:10311000-10327600 | Weak transcription | Aorta | Aorta |
| 9 | chr1:10311400-10321800 | Weak transcription | Primary T regulatory cells fromperipheralblood | blood |
| 10 | chr1:10311400-10322000 | Weak transcription | hESC Derived CD56+ Ectoderm Cultured Cells | ES cell derived |
| 11 | chr1:10311600-10331200 | Weak transcription | Fetal Thymus | thymus |
| 12 | chr1:10312600-10321800 | Weak transcription | Hela-S3 | cervix |
| 13 | chr1:10312600-10327600 | Weak transcription | HMEC | breast |
| 14 | chr1:10312800-10321800 | Weak transcription | NHEK | skin |
| 15 | chr1:10312800-10347200 | Weak transcription | iPS DF 19.11 Cell Line | embryonic stem cell |
| 16 | chr1:10313400-10318000 | Weak transcription | Stomach Mucosa | stomach |
| 17 | chr1:10313400-10320000 | Weak transcription | Foreskin Fibroblast Primary Cells skin02 | Skin |
| 18 | chr1:10313400-10327400 | Weak transcription | Colonic Mucosa | Colon |
| 19 | chr1:10313600-10322200 | Weak transcription | H1 Derived Mesenchymal Stem Cells | ES cell derived |
| 20 | chr1:10313800-10321800 | Weak transcription | Pancreas | Pancrea |
| 21 | chr1:10313800-10327600 | Weak transcription | Right Atrium | heart |
| 22 | chr1:10314000-10320000 | Weak transcription | Breast variant Human Mammary Epithelial Cells (vHMEC) | Breast |
| 23 | chr1:10314000-10320000 | Weak transcription | Sigmoid Colon | Sigmoid Colon |
| 24 | chr1:10314000-10321800 | Weak transcription | Foreskin Keratinocyte Primary Cells skin02 | Skin |
| 25 | chr1:10314000-10322000 | Weak transcription | Placenta Amnion | Placenta Amnion |
| 26 | chr1:10314000-10323600 | Weak transcription | Primary hematopoietic stem cells | blood |
| 27 | chr1:10314000-10331800 | Weak transcription | K562 | blood |
| 28 | chr1:10314200-10318600 | Weak transcription | Dnd41 | blood |
| 29 | chr1:10314200-10319600 | Weak transcription | Fetal Lung | lung |
| 30 | chr1:10314200-10321800 | Weak transcription | Right Ventricle | heart |
| 31 | chr1:10314200-10322000 | Weak transcription | Primary hematopoietic stem cells G-CSF-mobilized Male | -- |
| 32 | chr1:10314200-10323600 | Weak transcription | Primary hematopoietic stem cells G-CSF-mobilized Female | -- |
| 33 | chr1:10314200-10356400 | Weak transcription | Small Intestine | intestine |
| 34 | chr1:10314200-10363400 | Weak transcription | Fetal Brain Male | brain |
| 35 | chr1:10314400-10318000 | Weak transcription | Rectal Smooth Muscle | rectum |
| 36 | chr1:10314400-10318400 | Weak transcription | iPS-18 Cell Line | embryonic stem cell |
| 37 | chr1:10314400-10320000 | Weak transcription | Duodenum Smooth Muscle | Duodenum |
| 38 | chr1:10314400-10321800 | Weak transcription | Fetal Kidney | kidney |
| 39 | chr1:10314600-10318200 | Weak transcription | Brain Anterior Caudate | brain |
| 40 | chr1:10314600-10318600 | Weak transcription | Osteobl | bone |
| 41 | chr1:10314600-10321800 | Weak transcription | Muscle Satellite Cultured Cells | -- |
| 42 | chr1:10314600-10327400 | Weak transcription | Fetal Heart | heart |
| 43 | chr1:10314600-10332200 | Weak transcription | Pancreatic Islets | Pancreatic Islet |
| 44 | chr1:10314800-10347000 | Strong transcription | H9 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
| 45 | chr1:10315000-10318000 | Weak transcription | H1 Cell Line | embryonic stem cell |
| 46 | chr1:10315000-10318000 | Strong transcription | Fetal Stomach | stomach |
| 47 | chr1:10315000-10318400 | Weak transcription | Primary B cells from cord blood | blood |
| 48 | chr1:10315000-10318400 | Weak transcription | Primary T cells fromperipheralblood | blood |
| 49 | chr1:10315000-10355600 | Weak transcription | Primary T helper 17 cells PMA-I stimulated | -- |
| 50 | chr1:10315200-10318600 | Weak transcription | Primary hematopoietic stem cells short term culture | blood |
