Variant report

Variant rs1536262
Chromosome Location chr1:10438687-10438688
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:124 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:10393800-10444600 Strong transcription Cortex derived primary cultured neurospheres brain
2 chr1:10394200-10441800 Strong transcription Liver Liver
3 chr1:10400600-10446400 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
4 chr1:10400600-10447400 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
5 chr1:10409800-10447400 Weak transcription Small Intestine intestine
6 chr1:10418400-10445600 Strong transcription Fetal Brain Female brain
7 chr1:10419200-10442800 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
8 chr1:10419800-10441200 Strong transcription Fetal Stomach stomach
9 chr1:10420000-10440000 Weak transcription Primary T killer naive cells fromperipheralblood blood
10 chr1:10420200-10445000 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
11 chr1:10420200-10446000 Strong transcription Brain Germinal Matrix brain
12 chr1:10421000-10440000 Strong transcription Fetal Intestine Small intestine
13 chr1:10421000-10440200 Strong transcription Stomach Smooth Muscle stomach
14 chr1:10422400-10447200 Weak transcription Fetal Heart heart
15 chr1:10422600-10440600 Weak transcription Primary T killer memory cells from peripheral blood blood
16 chr1:10425200-10441600 Strong transcription Skeletal Muscle Female skeletal muscle
17 chr1:10425200-10441800 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
18 chr1:10425800-10447800 Weak transcription Psoas Muscle Psoas
19 chr1:10427800-10439800 Strong transcription iPS-18 Cell Line embryonic stem cell
20 chr1:10427800-10441800 Strong transcription HUES64 Cell Line embryonic stem cell
21 chr1:10428200-10440000 Strong transcription Foreskin Fibroblast Primary Cells skin02 Skin
22 chr1:10428400-10442000 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
23 chr1:10430400-10443800 Strong transcription iPS-20b Cell Line embryonic stem cell
24 chr1:10431200-10439200 Strong transcription Skeletal Muscle Male skeletal muscle
25 chr1:10431200-10439600 Strong transcription H1 Cell Line embryonic stem cell
26 chr1:10431200-10444800 Strong transcription ES-UCSF4 Cell Line embryonic stem cell
27 chr1:10432800-10439400 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
28 chr1:10433400-10439000 Strong transcription Primary T regulatory cells fromperipheralblood blood
29 chr1:10433400-10439400 Strong transcription HSMMtube muscle
30 chr1:10433400-10442000 Strong transcription HUES48 Cell Line embryonic stem cell
31 chr1:10433600-10438800 Strong transcription NHDF-Ad bronchial
32 chr1:10433600-10439600 Strong transcription Rectal Mucosa Donor 29 rectum
33 chr1:10433600-10439600 Strong transcription HepG2 liver
34 chr1:10433600-10440000 Strong transcription H9 Cell Line embryonic stem cell
35 chr1:10433600-10441400 Strong transcription ES-I3 Cell Line embryonic stem cell
36 chr1:10433600-10441800 Strong transcription HUES6 Cell Line embryonic stem cell
37 chr1:10434000-10439200 Strong transcription iPS-15b Cell Line embryonic stem cell
38 chr1:10434200-10439600 Strong transcription Primary T cells fromperipheralblood blood
39 chr1:10434200-10439600 Strong transcription Rectal Mucosa Donor 31 rectum
40 chr1:10434200-10440000 Strong transcription Pancreas Pancrea
41 chr1:10434200-10440400 Strong transcription Brain Inferior Temporal Lobe brain
42 chr1:10434400-10447400 Weak transcription HMEC breast
43 chr1:10434600-10439200 Strong transcription HSMM muscle
44 chr1:10435200-10439800 Weak transcription Esophagus oesophagus
45 chr1:10435400-10439200 Weak transcription Primary T helper 17 cells PMA-I stimulated --
46 chr1:10435400-10447800 Weak transcription Primary B cells from peripheral blood blood
47 chr1:10435400-10448000 Weak transcription Primary T helper cells fromperipheralblood blood
48 chr1:10435600-10440800 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
49 chr1:10435600-10441000 Weak transcription Pancreatic Islets Pancreatic Islet
50 chr1:10435600-10443200 Weak transcription Fetal Brain Male brain

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