Variant report

Variant rs11587495
Chromosome Location chr1:10448999-10449000
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:87 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:10438600-10458200 Weak transcription Right Atrium heart
2 chr1:10439600-10458200 Weak transcription Primary mononuclear cells fromperipheralblood Blood
3 chr1:10440000-10451800 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
4 chr1:10440000-10458400 Weak transcription Lung lung
5 chr1:10444800-10458200 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
6 chr1:10445600-10454000 Weak transcription Fetal Brain Female brain
7 chr1:10446400-10449600 Enhancers Placenta Placenta
8 chr1:10446400-10450400 Enhancers Primary monocytes fromperipheralblood blood
9 chr1:10446800-10449800 Enhancers Fetal Intestine Small intestine
10 chr1:10447000-10449000 Enhancers Liver Liver
11 chr1:10447000-10449000 Enhancers Colon Smooth Muscle Colon
12 chr1:10447000-10449000 Enhancers Fetal Intestine Large intestine
13 chr1:10447000-10449000 Enhancers Rectal Mucosa Donor 31 rectum
14 chr1:10447000-10449200 Enhancers Fetal Muscle Leg muscle
15 chr1:10447000-10449600 Enhancers Stomach Mucosa stomach
16 chr1:10447000-10450000 Enhancers Fetal Thymus thymus
17 chr1:10447200-10449000 Flanking Active TSS Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
18 chr1:10447200-10449600 Enhancers Fetal Muscle Trunk muscle
19 chr1:10447200-10449800 Flanking Active TSS Primary neutrophils fromperipheralblood blood
20 chr1:10447200-10450000 Enhancers Fetal Adrenal Gland Adrenal Gland
21 chr1:10447400-10449200 Enhancers Brain Cingulate Gyrus brain
22 chr1:10447600-10449000 Enhancers Brain Anterior Caudate brain
23 chr1:10447600-10449000 Enhancers Brain Inferior Temporal Lobe brain
24 chr1:10447600-10449200 Enhancers Primary hematopoietic stem cells blood
25 chr1:10447600-10449600 Flanking Active TSS Monocytes-CD14+_RO01746 blood
26 chr1:10447800-10449000 Enhancers Colonic Mucosa Colon
27 chr1:10447800-10449600 Enhancers Primary B cells from peripheral blood blood
28 chr1:10447800-10454000 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
29 chr1:10447800-10458400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
30 chr1:10448000-10449000 Flanking Active TSS Adipose Nuclei Adipose
31 chr1:10448000-10449000 Enhancers HSMMtube muscle
32 chr1:10448000-10449200 Enhancers Sigmoid Colon Sigmoid Colon
33 chr1:10448200-10449000 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
34 chr1:10448200-10449000 Enhancers Fetal Lung lung
35 chr1:10448200-10449000 Flanking Active TSS HepG2 liver
36 chr1:10448200-10449000 Enhancers NHDF-Ad bronchial
37 chr1:10448200-10452800 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
38 chr1:10448200-10454200 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
39 chr1:10448200-10458200 Weak transcription H1 Cell Line embryonic stem cell
40 chr1:10448200-10458200 Weak transcription H9 Cell Line embryonic stem cell
41 chr1:10448200-10458400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
42 chr1:10448400-10449000 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
43 chr1:10448400-10449000 Genic enhancers HUES6 Cell Line embryonic stem cell
44 chr1:10448400-10449000 Flanking Active TSS Primary hematopoietic stem cells short term culture blood
45 chr1:10448400-10449000 Flanking Active TSS Muscle Satellite Cultured Cells --
46 chr1:10448400-10449000 Enhancers Skeletal Muscle Male skeletal muscle
47 chr1:10448400-10449000 Enhancers Skeletal Muscle Female skeletal muscle
48 chr1:10448400-10449200 Enhancers Ganglion Eminence derived primary cultured neurospheres brain
49 chr1:10448400-10450000 Weak transcription HUES64 Cell Line embryonic stem cell
50 chr1:10448400-10454400 Weak transcription iPS-20b Cell Line embryonic stem cell

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