The 2.0 version of rSNPBase

Variant report

Variant rs2027330
Chromosome Location chr1:10275592-10275593
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:107 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:10272000-10275600 Weak transcription Primary T helper 17 cells PMA-I stimulated --
2 chr1:10272000-10275600 Weak transcription Primary T killer naive cells fromperipheralblood blood
3 chr1:10272200-10275600 Weak transcription Primary T cells fromperipheralblood blood
4 chr1:10272200-10275600 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
5 chr1:10272200-10275800 Weak transcription Sigmoid Colon Sigmoid Colon
6 chr1:10272200-10276000 Weak transcription Primary T helper cells fromperipheralblood blood
7 chr1:10272200-10276000 Weak transcription Primary T regulatory cells fromperipheralblood blood
8 chr1:10272200-10276400 Weak transcription Primary B cells from peripheral blood blood
9 chr1:10272200-10276400 Weak transcription Primary hematopoietic stem cells blood
10 chr1:10272200-10276600 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
11 chr1:10272200-10276600 Weak transcription Spleen Spleen
12 chr1:10272200-10277600 Weak transcription Esophagus oesophagus
13 chr1:10272200-10278000 Weak transcription Colonic Mucosa Colon
14 chr1:10272200-10278200 Weak transcription Placenta Placenta
15 chr1:10272400-10275600 Weak transcription ES-WA7 Cell Line embryonic stem cell
16 chr1:10272400-10276200 Weak transcription Primary monocytes fromperipheralblood blood
17 chr1:10272400-10276400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
18 chr1:10272600-10275600 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
19 chr1:10272600-10275600 Weak transcription Primary T helper cells PMA-I stimulated --
20 chr1:10272600-10275600 Weak transcription Aorta Aorta
21 chr1:10272600-10275800 Weak transcription Primary T killer memory cells from peripheral blood blood
22 chr1:10272600-10275800 Weak transcription A549 lung
23 chr1:10272600-10276000 Weak transcription Primary T helper naive cells from peripheral blood blood
24 chr1:10272600-10276000 Weak transcription Duodenum Mucosa Duodenum
25 chr1:10272600-10276200 Weak transcription Stomach Mucosa stomach
26 chr1:10272600-10277600 Weak transcription Monocytes-CD14+_RO01746 blood
27 chr1:10272600-10277800 Weak transcription Rectal Mucosa Donor 29 rectum
28 chr1:10272600-10277800 Weak transcription Rectal Mucosa Donor 31 rectum
29 chr1:10272600-10284000 Weak transcription Primary hematopoietic stem cells short term culture blood
30 chr1:10272600-10284000 Weak transcription Fetal Intestine Small intestine
31 chr1:10272600-10368200 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
32 chr1:10272800-10275600 Weak transcription GM12878-XiMat blood
33 chr1:10272800-10276600 Weak transcription Lung lung
34 chr1:10272800-10277600 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
35 chr1:10272800-10284000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
36 chr1:10272800-10284400 Weak transcription Gastric stomach
37 chr1:10272800-10290000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
38 chr1:10272800-10296600 Weak transcription Placenta Amnion Placenta Amnion
39 chr1:10273200-10276200 Enhancers Duodenum Smooth Muscle Duodenum
40 chr1:10273600-10277800 Weak transcription Pancreatic Islets Pancreatic Islet
41 chr1:10273600-10278200 Weak transcription Fetal Intestine Large intestine
42 chr1:10273800-10276200 Enhancers Brain Hippocampus Middle brain
43 chr1:10273800-10276200 Enhancers Brain Inferior Temporal Lobe brain
44 chr1:10273800-10276600 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
45 chr1:10273800-10276600 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
46 chr1:10274000-10275800 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
47 chr1:10274000-10275800 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
48 chr1:10274000-10275800 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
49 chr1:10274000-10275800 Weak transcription Rectal Smooth Muscle rectum
50 chr1:10274000-10276200 Weak transcription K562 blood

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Last update: Aug 31, 2015