The 2.0 version of rSNPBase

Variant report

Variant rs12117635
Chromosome Location chr1:10317445-10317446
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:118 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:10272600-10368200 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
2 chr1:10277000-10322000 Weak transcription Spleen Spleen
3 chr1:10293000-10322000 Weak transcription Primary T cells from cord blood blood
4 chr1:10295600-10317600 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
5 chr1:10295800-10322000 Weak transcription Lung lung
6 chr1:10302000-10321800 Weak transcription Esophagus oesophagus
7 chr1:10307600-10340400 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
8 chr1:10311000-10322000 Weak transcription Primary mononuclear cells fromperipheralblood Blood
9 chr1:10311000-10327600 Weak transcription Aorta Aorta
10 chr1:10311400-10321800 Weak transcription Primary T regulatory cells fromperipheralblood blood
11 chr1:10311400-10322000 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
12 chr1:10311600-10331200 Weak transcription Fetal Thymus thymus
13 chr1:10312600-10321800 Weak transcription Hela-S3 cervix
14 chr1:10312600-10327600 Weak transcription HMEC breast
15 chr1:10312800-10321800 Weak transcription NHEK skin
16 chr1:10312800-10347200 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
17 chr1:10313400-10318000 Weak transcription Stomach Mucosa stomach
18 chr1:10313400-10320000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
19 chr1:10313400-10327400 Weak transcription Colonic Mucosa Colon
20 chr1:10313600-10322200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
21 chr1:10313800-10321800 Weak transcription Pancreas Pancrea
22 chr1:10313800-10327600 Weak transcription Right Atrium heart
23 chr1:10314000-10317600 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
24 chr1:10314000-10320000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
25 chr1:10314000-10320000 Weak transcription Sigmoid Colon Sigmoid Colon
26 chr1:10314000-10321800 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
27 chr1:10314000-10322000 Weak transcription Placenta Amnion Placenta Amnion
28 chr1:10314000-10323600 Weak transcription Primary hematopoietic stem cells blood
29 chr1:10314000-10331800 Weak transcription K562 blood
30 chr1:10314200-10317600 Weak transcription Ovary ovary
31 chr1:10314200-10318600 Weak transcription Dnd41 blood
32 chr1:10314200-10319600 Weak transcription Fetal Lung lung
33 chr1:10314200-10321800 Weak transcription Right Ventricle heart
34 chr1:10314200-10322000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
35 chr1:10314200-10323600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
36 chr1:10314200-10356400 Weak transcription Small Intestine intestine
37 chr1:10314200-10363400 Weak transcription Fetal Brain Male brain
38 chr1:10314400-10317600 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
39 chr1:10314400-10317600 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
40 chr1:10314400-10317600 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
41 chr1:10314400-10317600 Weak transcription Duodenum Mucosa Duodenum
42 chr1:10314400-10318000 Weak transcription Rectal Smooth Muscle rectum
43 chr1:10314400-10318400 Weak transcription iPS-18 Cell Line embryonic stem cell
44 chr1:10314400-10320000 Weak transcription Duodenum Smooth Muscle Duodenum
45 chr1:10314400-10321800 Weak transcription Fetal Kidney kidney
46 chr1:10314600-10317600 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
47 chr1:10314600-10317600 Weak transcription Adipose Nuclei Adipose
48 chr1:10314600-10317600 Weak transcription NHLF lung
49 chr1:10314600-10318200 Weak transcription Brain Anterior Caudate brain
50 chr1:10314600-10318600 Weak transcription Osteobl bone

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Last update: Aug 31, 2015