Variant report

Variant rs61778401
Chromosome Location chr1:10426474-10426475
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:127 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:10364600-10431000 Weak transcription Placenta Amnion Placenta Amnion
2 chr1:10380400-10436600 Weak transcription ES-WA7 Cell Line embryonic stem cell
3 chr1:10381000-10436400 Strong transcription Ganglion Eminence derived primary cultured neurospheres brain
4 chr1:10385200-10436400 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
5 chr1:10386000-10434800 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
6 chr1:10393200-10431200 Weak transcription Primary T helper naive cells from peripheral blood blood
7 chr1:10393600-10430800 Strong transcription Primary neutrophils fromperipheralblood blood
8 chr1:10393800-10444600 Strong transcription Cortex derived primary cultured neurospheres brain
9 chr1:10394200-10441800 Strong transcription Liver Liver
10 chr1:10397800-10434800 Weak transcription Primary B cells from peripheral blood blood
11 chr1:10398000-10438000 Weak transcription GM12878-XiMat blood
12 chr1:10400200-10438200 Weak transcription Stomach Mucosa stomach
13 chr1:10400600-10434600 Weak transcription K562 blood
14 chr1:10400600-10446400 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
15 chr1:10400600-10447400 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
16 chr1:10402600-10437200 Strong transcription Fetal Adrenal Gland Adrenal Gland
17 chr1:10404400-10433800 Weak transcription Dnd41 blood
18 chr1:10409000-10427800 Weak transcription iPS-15b Cell Line embryonic stem cell
19 chr1:10409800-10447400 Weak transcription Small Intestine intestine
20 chr1:10411600-10431200 Weak transcription HUVEC blood vessel
21 chr1:10418400-10445600 Strong transcription Fetal Brain Female brain
22 chr1:10418600-10427000 Strong transcription Monocytes-CD14+_RO01746 blood
23 chr1:10419200-10426600 Strong transcription Brain Inferior Temporal Lobe brain
24 chr1:10419200-10437800 Weak transcription Right Atrium heart
25 chr1:10419200-10442800 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
26 chr1:10419800-10441200 Strong transcription Fetal Stomach stomach
27 chr1:10420000-10440000 Weak transcription Primary T killer naive cells fromperipheralblood blood
28 chr1:10420200-10426600 Strong transcription HSMMtube muscle
29 chr1:10420200-10426800 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
30 chr1:10420200-10427000 Strong transcription HUES64 Cell Line embryonic stem cell
31 chr1:10420200-10429600 Strong transcription HUES48 Cell Line embryonic stem cell
32 chr1:10420200-10432800 Strong transcription HUES6 Cell Line embryonic stem cell
33 chr1:10420200-10445000 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
34 chr1:10420200-10446000 Strong transcription Brain Germinal Matrix brain
35 chr1:10420800-10429800 Strong transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
36 chr1:10420800-10429800 Strong transcription ES-UCSF4 Cell Line embryonic stem cell
37 chr1:10420800-10437400 Strong transcription Fetal Muscle Trunk muscle
38 chr1:10421000-10429800 Strong transcription Skeletal Muscle Male skeletal muscle
39 chr1:10421000-10440000 Strong transcription Fetal Intestine Small intestine
40 chr1:10421000-10440200 Strong transcription Stomach Smooth Muscle stomach
41 chr1:10422000-10428000 Weak transcription Fetal Kidney kidney
42 chr1:10422000-10431200 Weak transcription HMEC breast
43 chr1:10422200-10431400 Weak transcription Primary B cells from cord blood blood
44 chr1:10422400-10447200 Weak transcription Fetal Heart heart
45 chr1:10422600-10440600 Weak transcription Primary T killer memory cells from peripheral blood blood
46 chr1:10423400-10427000 Strong transcription H1 Derived Mesenchymal Stem Cells ES cell derived
47 chr1:10424200-10428200 Weak transcription NHDF-Ad bronchial
48 chr1:10424800-10429800 Strong transcription Fetal Intestine Large intestine
49 chr1:10424800-10433000 Strong transcription Brain Hippocampus Middle brain
50 chr1:10425000-10426600 Strong transcription IMR90 fetal lung fibroblasts Cell Line lung

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