The 2.0 version of rSNPBase

Variant report

Variant rs1138791
Chromosome Location chr1:10440556-10440557
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:120 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:10393800-10444600 Strong transcription Cortex derived primary cultured neurospheres brain
2 chr1:10394200-10441800 Strong transcription Liver Liver
3 chr1:10400600-10446400 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
4 chr1:10400600-10447400 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
5 chr1:10409800-10447400 Weak transcription Small Intestine intestine
6 chr1:10418400-10445600 Strong transcription Fetal Brain Female brain
7 chr1:10419200-10442800 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
8 chr1:10419800-10441200 Strong transcription Fetal Stomach stomach
9 chr1:10420200-10445000 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
10 chr1:10420200-10446000 Strong transcription Brain Germinal Matrix brain
11 chr1:10422400-10447200 Weak transcription Fetal Heart heart
12 chr1:10422600-10440600 Weak transcription Primary T killer memory cells from peripheral blood blood
13 chr1:10425200-10441600 Strong transcription Skeletal Muscle Female skeletal muscle
14 chr1:10425200-10441800 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
15 chr1:10425800-10447800 Weak transcription Psoas Muscle Psoas
16 chr1:10427800-10441800 Strong transcription HUES64 Cell Line embryonic stem cell
17 chr1:10428400-10442000 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
18 chr1:10430400-10443800 Strong transcription iPS-20b Cell Line embryonic stem cell
19 chr1:10431200-10444800 Strong transcription ES-UCSF4 Cell Line embryonic stem cell
20 chr1:10433400-10442000 Strong transcription HUES48 Cell Line embryonic stem cell
21 chr1:10433600-10441400 Strong transcription ES-I3 Cell Line embryonic stem cell
22 chr1:10433600-10441800 Strong transcription HUES6 Cell Line embryonic stem cell
23 chr1:10434400-10447400 Weak transcription HMEC breast
24 chr1:10435400-10447800 Weak transcription Primary B cells from peripheral blood blood
25 chr1:10435400-10448000 Weak transcription Primary T helper cells fromperipheralblood blood
26 chr1:10435600-10440800 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
27 chr1:10435600-10441000 Weak transcription Pancreatic Islets Pancreatic Islet
28 chr1:10435600-10443200 Weak transcription Fetal Brain Male brain
29 chr1:10435600-10444400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
30 chr1:10435600-10447400 Weak transcription Aorta Aorta
31 chr1:10435600-10447600 Weak transcription Thymus Thymus
32 chr1:10435600-10448800 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
33 chr1:10435600-10448800 Weak transcription Gastric stomach
34 chr1:10435800-10448000 Weak transcription Sigmoid Colon Sigmoid Colon
35 chr1:10436000-10441000 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
36 chr1:10436800-10448400 Weak transcription Primary T helper naive cells fromperipheralblood blood
37 chr1:10437000-10447800 Weak transcription Left Ventricle heart
38 chr1:10437000-10448000 Weak transcription Primary T helper cells PMA-I stimulated --
39 chr1:10437400-10440600 Enhancers Primary monocytes fromperipheralblood blood
40 chr1:10437400-10447000 Weak transcription Dnd41 blood
41 chr1:10437400-10447600 Weak transcription Primary hematopoietic stem cells blood
42 chr1:10437600-10442000 Strong transcription Ganglion Eminence derived primary cultured neurospheres brain
43 chr1:10437600-10443600 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
44 chr1:10437600-10447800 Weak transcription Primary T helper naive cells from peripheral blood blood
45 chr1:10438600-10440800 Strong transcription Brain Dorsolateral Prefrontal Cortex brain
46 chr1:10438600-10440800 Weak transcription Stomach Mucosa stomach
47 chr1:10438600-10441000 Weak transcription Ovary ovary
48 chr1:10438600-10445800 Strong transcription Fetal Muscle Leg muscle
49 chr1:10438600-10447000 Weak transcription Primary B cells from cord blood blood
50 chr1:10438600-10458200 Weak transcription Right Atrium heart

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Last update: Aug 31, 2015