The 2.0 version of rSNPBase

Variant report

Variant rs35811280
Chromosome Location chr1:10444202-10444203
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:113 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:10393800-10444600 Strong transcription Cortex derived primary cultured neurospheres brain
2 chr1:10400600-10446400 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
3 chr1:10400600-10447400 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
4 chr1:10409800-10447400 Weak transcription Small Intestine intestine
5 chr1:10418400-10445600 Strong transcription Fetal Brain Female brain
6 chr1:10420200-10445000 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
7 chr1:10420200-10446000 Strong transcription Brain Germinal Matrix brain
8 chr1:10422400-10447200 Weak transcription Fetal Heart heart
9 chr1:10425800-10447800 Weak transcription Psoas Muscle Psoas
10 chr1:10431200-10444800 Strong transcription ES-UCSF4 Cell Line embryonic stem cell
11 chr1:10434400-10447400 Weak transcription HMEC breast
12 chr1:10435400-10447800 Weak transcription Primary B cells from peripheral blood blood
13 chr1:10435400-10448000 Weak transcription Primary T helper cells fromperipheralblood blood
14 chr1:10435600-10444400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
15 chr1:10435600-10447400 Weak transcription Aorta Aorta
16 chr1:10435600-10447600 Weak transcription Thymus Thymus
17 chr1:10435600-10448800 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
18 chr1:10435600-10448800 Weak transcription Gastric stomach
19 chr1:10435800-10448000 Weak transcription Sigmoid Colon Sigmoid Colon
20 chr1:10436800-10448400 Weak transcription Primary T helper naive cells fromperipheralblood blood
21 chr1:10437000-10447800 Weak transcription Left Ventricle heart
22 chr1:10437000-10448000 Weak transcription Primary T helper cells PMA-I stimulated --
23 chr1:10437400-10447000 Weak transcription Dnd41 blood
24 chr1:10437400-10447600 Weak transcription Primary hematopoietic stem cells blood
25 chr1:10437600-10447800 Weak transcription Primary T helper naive cells from peripheral blood blood
26 chr1:10438600-10445800 Strong transcription Fetal Muscle Leg muscle
27 chr1:10438600-10447000 Weak transcription Primary B cells from cord blood blood
28 chr1:10438600-10458200 Weak transcription Right Atrium heart
29 chr1:10438800-10445400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
30 chr1:10438800-10445400 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
31 chr1:10438800-10446400 Weak transcription Hela-S3 cervix
32 chr1:10438800-10447600 Weak transcription Fetal Kidney kidney
33 chr1:10438800-10448000 Weak transcription Spleen Spleen
34 chr1:10439000-10447600 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
35 chr1:10439000-10448200 Weak transcription Primary T regulatory cells fromperipheralblood blood
36 chr1:10439200-10447200 Weak transcription Fetal Lung lung
37 chr1:10439200-10447200 Weak transcription Skeletal Muscle Male skeletal muscle
38 chr1:10439200-10447600 Weak transcription iPS-15b Cell Line embryonic stem cell
39 chr1:10439400-10446400 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
40 chr1:10439400-10447000 Weak transcription Fetal Thymus thymus
41 chr1:10439400-10447000 Weak transcription NHEK skin
42 chr1:10439400-10447400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
43 chr1:10439600-10445200 Weak transcription HepG2 liver
44 chr1:10439600-10447000 Weak transcription Colon Smooth Muscle Colon
45 chr1:10439600-10447000 Weak transcription Rectal Mucosa Donor 31 rectum
46 chr1:10439600-10447200 Weak transcription Primary Natural Killer cells fromperipheralblood blood
47 chr1:10439600-10447400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
48 chr1:10439600-10447400 Weak transcription Rectal Mucosa Donor 29 rectum
49 chr1:10439600-10447600 Weak transcription H1 Cell Line embryonic stem cell
50 chr1:10439600-10447800 Weak transcription Primary T cells from cord blood blood

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Last update: Aug 31, 2015