The 2.0 version of rSNPBase

Variant report

Variant rs1013952
Chromosome Location chr1:10319247-10319248
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:121 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:10272600-10368200 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
2 chr1:10277000-10322000 Weak transcription Spleen Spleen
3 chr1:10293000-10322000 Weak transcription Primary T cells from cord blood blood
4 chr1:10295800-10322000 Weak transcription Lung lung
5 chr1:10302000-10321800 Weak transcription Esophagus oesophagus
6 chr1:10307600-10340400 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
7 chr1:10311000-10322000 Weak transcription Primary mononuclear cells fromperipheralblood Blood
8 chr1:10311000-10327600 Weak transcription Aorta Aorta
9 chr1:10311400-10321800 Weak transcription Primary T regulatory cells fromperipheralblood blood
10 chr1:10311400-10322000 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
11 chr1:10311600-10331200 Weak transcription Fetal Thymus thymus
12 chr1:10312600-10321800 Weak transcription Hela-S3 cervix
13 chr1:10312600-10327600 Weak transcription HMEC breast
14 chr1:10312800-10321800 Weak transcription NHEK skin
15 chr1:10312800-10347200 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
16 chr1:10313400-10320000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
17 chr1:10313400-10327400 Weak transcription Colonic Mucosa Colon
18 chr1:10313600-10322200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
19 chr1:10313800-10321800 Weak transcription Pancreas Pancrea
20 chr1:10313800-10327600 Weak transcription Right Atrium heart
21 chr1:10314000-10320000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
22 chr1:10314000-10320000 Weak transcription Sigmoid Colon Sigmoid Colon
23 chr1:10314000-10321800 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
24 chr1:10314000-10322000 Weak transcription Placenta Amnion Placenta Amnion
25 chr1:10314000-10323600 Weak transcription Primary hematopoietic stem cells blood
26 chr1:10314000-10331800 Weak transcription K562 blood
27 chr1:10314200-10319600 Weak transcription Fetal Lung lung
28 chr1:10314200-10321800 Weak transcription Right Ventricle heart
29 chr1:10314200-10322000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
30 chr1:10314200-10323600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
31 chr1:10314200-10356400 Weak transcription Small Intestine intestine
32 chr1:10314200-10363400 Weak transcription Fetal Brain Male brain
33 chr1:10314400-10320000 Weak transcription Duodenum Smooth Muscle Duodenum
34 chr1:10314400-10321800 Weak transcription Fetal Kidney kidney
35 chr1:10314600-10321800 Weak transcription Muscle Satellite Cultured Cells --
36 chr1:10314600-10327400 Weak transcription Fetal Heart heart
37 chr1:10314600-10332200 Weak transcription Pancreatic Islets Pancreatic Islet
38 chr1:10314800-10347000 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
39 chr1:10315000-10355600 Weak transcription Primary T helper 17 cells PMA-I stimulated --
40 chr1:10315400-10327600 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
41 chr1:10315400-10373400 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
42 chr1:10315600-10320400 Strong transcription Breast Myoepithelial Primary Cells Breast
43 chr1:10315600-10320400 Strong transcription NHDF-Ad bronchial
44 chr1:10316000-10320600 Strong transcription Monocytes-CD14+_RO01746 blood
45 chr1:10316200-10320400 Strong transcription HUES6 Cell Line embryonic stem cell
46 chr1:10316200-10320600 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
47 chr1:10316200-10320600 Strong transcription HUES64 Cell Line embryonic stem cell
48 chr1:10316200-10320600 Strong transcription iPS-20b Cell Line embryonic stem cell
49 chr1:10316200-10321800 Weak transcription iPS-15b Cell Line embryonic stem cell
50 chr1:10316400-10320400 Strong transcription Placenta Placenta

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Last update: Aug 31, 2015