The 2.0 version of rSNPBase

Variant report

Variant rs4846199
Chromosome Location chr1:10283961-10283962
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:66 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:10272600-10284000 Weak transcription Primary hematopoietic stem cells short term culture blood
2 chr1:10272600-10284000 Weak transcription Fetal Intestine Small intestine
3 chr1:10272600-10368200 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
4 chr1:10272800-10284000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
5 chr1:10272800-10284400 Weak transcription Gastric stomach
6 chr1:10272800-10290000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
7 chr1:10272800-10296600 Weak transcription Placenta Amnion Placenta Amnion
8 chr1:10274000-10285200 Weak transcription HUES64 Cell Line embryonic stem cell
9 chr1:10274200-10284600 Weak transcription ES-I3 Cell Line embryonic stem cell
10 chr1:10276800-10311800 Weak transcription Hela-S3 cervix
11 chr1:10277000-10322000 Weak transcription Spleen Spleen
12 chr1:10278200-10285000 Weak transcription Sigmoid Colon Sigmoid Colon
13 chr1:10278200-10285200 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
14 chr1:10278400-10284400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
15 chr1:10278400-10285000 Weak transcription Breast Myoepithelial Primary Cells Breast
16 chr1:10278400-10285000 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
17 chr1:10278400-10285000 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
18 chr1:10278400-10285000 Weak transcription Aorta Aorta
19 chr1:10278400-10285000 Weak transcription Fetal Kidney kidney
20 chr1:10278400-10285000 Weak transcription HSMM muscle
21 chr1:10278400-10285000 Weak transcription NH-A brain
22 chr1:10278400-10285200 Weak transcription Pancreas Pancrea
23 chr1:10278400-10291000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
24 chr1:10278400-10295200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
25 chr1:10278400-10302000 Weak transcription Rectal Mucosa Donor 31 rectum
26 chr1:10278600-10284400 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
27 chr1:10278600-10284600 Weak transcription Fetal Stomach stomach
28 chr1:10278600-10285000 Weak transcription Fetal Heart heart
29 chr1:10278600-10294800 Weak transcription Primary neutrophils fromperipheralblood blood
30 chr1:10278800-10284200 Weak transcription Right Atrium heart
31 chr1:10278800-10285000 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
32 chr1:10278800-10292400 Weak transcription Fetal Muscle Leg muscle
33 chr1:10278800-10296400 Weak transcription Fetal Lung lung
34 chr1:10279000-10284600 Weak transcription Muscle Satellite Cultured Cells --
35 chr1:10279000-10284800 Weak transcription Osteobl bone
36 chr1:10279000-10285000 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
37 chr1:10279200-10284400 Weak transcription Brain Inferior Temporal Lobe brain
38 chr1:10279200-10284600 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
39 chr1:10279800-10284400 Weak transcription Brain Cingulate Gyrus brain
40 chr1:10279800-10297800 Weak transcription ES-WA7 Cell Line embryonic stem cell
41 chr1:10281000-10284400 Weak transcription Right Ventricle heart
42 chr1:10281000-10294800 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
43 chr1:10281400-10285000 Weak transcription Lung lung
44 chr1:10281400-10285200 Weak transcription Fetal Muscle Trunk muscle
45 chr1:10282400-10285000 ZNF genes & repeats hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
46 chr1:10282600-10284000 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
47 chr1:10282600-10284000 Weak transcription Psoas Muscle Psoas
48 chr1:10282600-10284400 Weak transcription Skeletal Muscle Female skeletal muscle
49 chr1:10282600-10291000 Weak transcription Fetal Brain Female brain
50 chr1:10282800-10284000 Weak transcription Brain Anterior Caudate brain

Quick Search:


  
Input of quick search could be:

what's new

Quick links

Copyright © 2015, Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences. All Rights Reserved Feedback
Last update: Aug 31, 2015