The 2.0 version of rSNPBase

Variant report

Variant rs4846198
Chromosome Location chr1:10282186-10282187
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:66 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:10272600-10284000 Weak transcription Primary hematopoietic stem cells short term culture blood
2 chr1:10272600-10284000 Weak transcription Fetal Intestine Small intestine
3 chr1:10272600-10368200 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
4 chr1:10272800-10284000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
5 chr1:10272800-10284400 Weak transcription Gastric stomach
6 chr1:10272800-10290000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
7 chr1:10272800-10296600 Weak transcription Placenta Amnion Placenta Amnion
8 chr1:10274000-10282400 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
9 chr1:10274000-10285200 Weak transcription HUES64 Cell Line embryonic stem cell
10 chr1:10274200-10284600 Weak transcription ES-I3 Cell Line embryonic stem cell
11 chr1:10276800-10311800 Weak transcription Hela-S3 cervix
12 chr1:10277000-10322000 Weak transcription Spleen Spleen
13 chr1:10278200-10285000 Weak transcription Sigmoid Colon Sigmoid Colon
14 chr1:10278200-10285200 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
15 chr1:10278400-10282400 Weak transcription Fetal Brain Female brain
16 chr1:10278400-10283800 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
17 chr1:10278400-10284400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
18 chr1:10278400-10285000 Weak transcription Breast Myoepithelial Primary Cells Breast
19 chr1:10278400-10285000 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
20 chr1:10278400-10285000 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
21 chr1:10278400-10285000 Weak transcription Aorta Aorta
22 chr1:10278400-10285000 Weak transcription Fetal Kidney kidney
23 chr1:10278400-10285000 Weak transcription HSMM muscle
24 chr1:10278400-10285000 Weak transcription NH-A brain
25 chr1:10278400-10285200 Weak transcription Pancreas Pancrea
26 chr1:10278400-10291000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
27 chr1:10278400-10295200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
28 chr1:10278400-10302000 Weak transcription Rectal Mucosa Donor 31 rectum
29 chr1:10278600-10282200 Weak transcription Psoas Muscle Psoas
30 chr1:10278600-10282600 Weak transcription A549 lung
31 chr1:10278600-10283800 Weak transcription Cortex derived primary cultured neurospheres brain
32 chr1:10278600-10284400 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
33 chr1:10278600-10284600 Weak transcription Fetal Stomach stomach
34 chr1:10278600-10285000 Weak transcription Fetal Heart heart
35 chr1:10278600-10294800 Weak transcription Primary neutrophils fromperipheralblood blood
36 chr1:10278800-10282200 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
37 chr1:10278800-10282200 Weak transcription Rectal Smooth Muscle rectum
38 chr1:10278800-10284200 Weak transcription Right Atrium heart
39 chr1:10278800-10285000 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
40 chr1:10278800-10292400 Weak transcription Fetal Muscle Leg muscle
41 chr1:10278800-10296400 Weak transcription Fetal Lung lung
42 chr1:10279000-10282200 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
43 chr1:10279000-10282200 Weak transcription Adipose Nuclei Adipose
44 chr1:10279000-10284600 Weak transcription Muscle Satellite Cultured Cells --
45 chr1:10279000-10284800 Weak transcription Osteobl bone
46 chr1:10279000-10285000 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
47 chr1:10279200-10282200 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
48 chr1:10279200-10283400 Weak transcription Colon Smooth Muscle Colon
49 chr1:10279200-10284400 Weak transcription Brain Inferior Temporal Lobe brain
50 chr1:10279200-10284600 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow

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Last update: Aug 31, 2015