The 2.0 version of rSNPBase

Variant report

Variant rs7520259
Chromosome Location chr1:10274387-10274388
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:108 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:10272000-10275600 Weak transcription Primary T helper 17 cells PMA-I stimulated --
2 chr1:10272000-10275600 Weak transcription Primary T killer naive cells fromperipheralblood blood
3 chr1:10272200-10275600 Weak transcription Primary T cells fromperipheralblood blood
4 chr1:10272200-10275600 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
5 chr1:10272200-10275800 Weak transcription Sigmoid Colon Sigmoid Colon
6 chr1:10272200-10276000 Weak transcription Primary T helper cells fromperipheralblood blood
7 chr1:10272200-10276000 Weak transcription Primary T regulatory cells fromperipheralblood blood
8 chr1:10272200-10276400 Weak transcription Primary B cells from peripheral blood blood
9 chr1:10272200-10276400 Weak transcription Primary hematopoietic stem cells blood
10 chr1:10272200-10276600 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
11 chr1:10272200-10276600 Weak transcription Spleen Spleen
12 chr1:10272200-10277600 Weak transcription Esophagus oesophagus
13 chr1:10272200-10278000 Weak transcription Colonic Mucosa Colon
14 chr1:10272200-10278200 Weak transcription Placenta Placenta
15 chr1:10272400-10274400 Enhancers Colon Smooth Muscle Colon
16 chr1:10272400-10274400 Enhancers Fetal Stomach stomach
17 chr1:10272400-10275600 Weak transcription ES-WA7 Cell Line embryonic stem cell
18 chr1:10272400-10276200 Weak transcription Primary monocytes fromperipheralblood blood
19 chr1:10272400-10276400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
20 chr1:10272600-10274400 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
21 chr1:10272600-10274400 Enhancers Fetal Heart heart
22 chr1:10272600-10274400 Enhancers Fetal Lung lung
23 chr1:10272600-10274400 Enhancers Hela-S3 cervix
24 chr1:10272600-10274400 Enhancers NHLF lung
25 chr1:10272600-10274600 Enhancers Fetal Adrenal Gland Adrenal Gland
26 chr1:10272600-10275000 Enhancers Primary neutrophils fromperipheralblood blood
27 chr1:10272600-10275000 Enhancers Fetal Brain Male brain
28 chr1:10272600-10275600 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
29 chr1:10272600-10275600 Weak transcription Primary T helper cells PMA-I stimulated --
30 chr1:10272600-10275600 Weak transcription Aorta Aorta
31 chr1:10272600-10275800 Weak transcription Primary T killer memory cells from peripheral blood blood
32 chr1:10272600-10275800 Weak transcription A549 lung
33 chr1:10272600-10276000 Weak transcription Primary T helper naive cells from peripheral blood blood
34 chr1:10272600-10276000 Weak transcription Duodenum Mucosa Duodenum
35 chr1:10272600-10276200 Weak transcription Stomach Mucosa stomach
36 chr1:10272600-10277600 Weak transcription Monocytes-CD14+_RO01746 blood
37 chr1:10272600-10277800 Weak transcription Rectal Mucosa Donor 29 rectum
38 chr1:10272600-10277800 Weak transcription Rectal Mucosa Donor 31 rectum
39 chr1:10272600-10284000 Weak transcription Primary hematopoietic stem cells short term culture blood
40 chr1:10272600-10284000 Weak transcription Fetal Intestine Small intestine
41 chr1:10272600-10368200 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
42 chr1:10272800-10274400 Enhancers Breast Myoepithelial Primary Cells Breast
43 chr1:10272800-10274400 Enhancers Brain Cingulate Gyrus brain
44 chr1:10272800-10275600 Weak transcription GM12878-XiMat blood
45 chr1:10272800-10276600 Weak transcription Lung lung
46 chr1:10272800-10277600 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
47 chr1:10272800-10284000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
48 chr1:10272800-10284400 Weak transcription Gastric stomach
49 chr1:10272800-10290000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
50 chr1:10272800-10296600 Weak transcription Placenta Amnion Placenta Amnion

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Last update: Aug 31, 2015