The 2.0 version of rSNPBase

Variant report

Variant rs61784579
Chromosome Location chr1:10268852-10268853
allele A/T
Outlinks Ensembl   UCSC
Chromatin state (count:17 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:10250000-10269800 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
2 chr1:10262000-10269400 Weak transcription Fetal Brain Male brain
3 chr1:10264600-10269400 Weak transcription HSMMtube muscle
4 chr1:10264800-10269000 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
5 chr1:10265400-10269400 Weak transcription Skeletal Muscle Male skeletal muscle
6 chr1:10265400-10269400 Weak transcription HepG2 liver
7 chr1:10265400-10269600 Weak transcription Skeletal Muscle Female skeletal muscle
8 chr1:10267600-10269200 Enhancers Ganglion Eminence derived primary cultured neurospheres brain
9 chr1:10268200-10269000 Enhancers Primary monocytes fromperipheralblood blood
10 chr1:10268200-10269400 Enhancers Cortex derived primary cultured neurospheres brain
11 chr1:10268400-10269200 Flanking Active TSS Primary neutrophils fromperipheralblood blood
12 chr1:10268600-10269600 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
13 chr1:10268600-10270400 Flanking Active TSS Monocytes-CD14+_RO01746 blood
14 chr1:10268800-10269200 Active TSS Primary B cells from cord blood blood
15 chr1:10268800-10269200 Weak transcription Fetal Adrenal Gland Adrenal Gland
16 chr1:10268800-10269200 Active TSS Rectal Mucosa Donor 29 rectum
17 chr1:10268800-10269800 Enhancers Primary B cells from peripheral blood blood

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Last update: Aug 31, 2015