The 2.0 version of rSNPBase

Variant report

Variant rs35838987
Chromosome Location chr7:117420807-117420808
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:47 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr7:117356200-117431400 Weak transcription HUES6 Cell Line embryonic stem cell
2 chr7:117375200-117431600 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
3 chr7:117396400-117450200 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
4 chr7:117396600-117431200 Weak transcription Aorta Aorta
5 chr7:117396800-117421000 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
6 chr7:117397000-117431200 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
7 chr7:117397000-117431200 Weak transcription Fetal Intestine Small intestine
8 chr7:117397000-117431600 Weak transcription Ovary ovary
9 chr7:117397200-117421400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
10 chr7:117397200-117431200 Weak transcription Pancreas Pancrea
11 chr7:117398600-117431200 Weak transcription Fetal Stomach stomach
12 chr7:117400800-117431200 Weak transcription Cortex derived primary cultured neurospheres brain
13 chr7:117401400-117434000 Weak transcription Rectal Smooth Muscle rectum
14 chr7:117409800-117433400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
15 chr7:117412200-117431200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
16 chr7:117412200-117431200 Weak transcription H9 Cell Line embryonic stem cell
17 chr7:117412400-117431200 Weak transcription Esophagus oesophagus
18 chr7:117415600-117421000 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
19 chr7:117415600-117421000 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
20 chr7:117415600-117421000 Weak transcription Fetal Heart heart
21 chr7:117415800-117421000 Weak transcription Brain Cingulate Gyrus brain
22 chr7:117416600-117421000 Weak transcription Brain Substantia Nigra brain
23 chr7:117417000-117425800 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
24 chr7:117417400-117421000 Weak transcription NH-A brain
25 chr7:117417800-117421200 Weak transcription Brain Inferior Temporal Lobe brain
26 chr7:117417800-117425800 Weak transcription Brain Angular Gyrus brain
27 chr7:117417800-117431200 Weak transcription H1 Cell Line embryonic stem cell
28 chr7:117417800-117431200 Weak transcription Brain Germinal Matrix brain
29 chr7:117417800-117431600 Weak transcription HUES64 Cell Line embryonic stem cell
30 chr7:117418000-117421200 Weak transcription NHLF lung
31 chr7:117418000-117423000 Weak transcription Fetal Brain Male brain
32 chr7:117418000-117427400 Weak transcription Breast Myoepithelial Primary Cells Breast
33 chr7:117418000-117430400 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
34 chr7:117418000-117431200 Weak transcription Adipose Nuclei Adipose
35 chr7:117418000-117431200 Weak transcription Stomach Smooth Muscle stomach
36 chr7:117418000-117431400 Weak transcription Fetal Lung lung
37 chr7:117418200-117423600 Weak transcription HUES48 Cell Line embryonic stem cell
38 chr7:117418400-117422800 Weak transcription Fetal Brain Female brain
39 chr7:117418400-117423400 Weak transcription iPS-20b Cell Line embryonic stem cell
40 chr7:117418400-117430400 Weak transcription iPS-18 Cell Line embryonic stem cell
41 chr7:117419800-117422000 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
42 chr7:117420600-117421400 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
43 chr7:117420600-117421400 Flanking Active TSS GM12878-XiMat blood
44 chr7:117420600-117421600 Enhancers Brain Hippocampus Middle brain
45 chr7:117420600-117422000 Enhancers Brain Anterior Caudate brain
46 chr7:117420800-117421800 Enhancers Primary hematopoietic stem cells short term culture blood
47 chr7:117420800-117423600 Weak transcription Brain Dorsolateral Prefrontal Cortex brain

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Last update: Aug 31, 2015