The 2.0 version of rSNPBase

Variant report

Variant rs35280089
Chromosome Location chr7:117415281-117415282
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:53 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr7:117354800-117417200 Weak transcription iPS-15b Cell Line embryonic stem cell
2 chr7:117356200-117431400 Weak transcription HUES6 Cell Line embryonic stem cell
3 chr7:117375200-117431600 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
4 chr7:117396400-117450200 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
5 chr7:117396600-117431200 Weak transcription Aorta Aorta
6 chr7:117396800-117421000 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
7 chr7:117397000-117431200 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
8 chr7:117397000-117431200 Weak transcription Fetal Intestine Small intestine
9 chr7:117397000-117431600 Weak transcription Ovary ovary
10 chr7:117397200-117421400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
11 chr7:117397200-117431200 Weak transcription Pancreas Pancrea
12 chr7:117398600-117431200 Weak transcription Fetal Stomach stomach
13 chr7:117400800-117431200 Weak transcription Cortex derived primary cultured neurospheres brain
14 chr7:117401400-117434000 Weak transcription Rectal Smooth Muscle rectum
15 chr7:117402400-117419200 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
16 chr7:117405000-117419600 Weak transcription ES-WA7 Cell Line embryonic stem cell
17 chr7:117405800-117418400 Strong transcription iPS-20b Cell Line embryonic stem cell
18 chr7:117409200-117416200 Weak transcription HUES48 Cell Line embryonic stem cell
19 chr7:117409200-117416800 Weak transcription Sigmoid Colon Sigmoid Colon
20 chr7:117409400-117415400 Weak transcription H1 Cell Line embryonic stem cell
21 chr7:117409400-117416000 Weak transcription HUES64 Cell Line embryonic stem cell
22 chr7:117409800-117433400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
23 chr7:117410000-117416400 Weak transcription iPS-18 Cell Line embryonic stem cell
24 chr7:117410200-117418400 Strong transcription Fetal Brain Female brain
25 chr7:117410400-117418000 Strong transcription Breast Myoepithelial Primary Cells Breast
26 chr7:117411400-117418000 Strong transcription Fetal Lung lung
27 chr7:117411800-117417400 Weak transcription Stomach Smooth Muscle stomach
28 chr7:117412200-117431200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
29 chr7:117412200-117431200 Weak transcription H9 Cell Line embryonic stem cell
30 chr7:117412400-117415400 Weak transcription Brain Inferior Temporal Lobe brain
31 chr7:117412400-117415400 Weak transcription Right Atrium heart
32 chr7:117412400-117416800 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
33 chr7:117412400-117431200 Weak transcription Esophagus oesophagus
34 chr7:117412600-117415400 Weak transcription Brain Hippocampus Middle brain
35 chr7:117412600-117415400 Weak transcription Brain Substantia Nigra brain
36 chr7:117412800-117417400 Weak transcription Brain Angular Gyrus brain
37 chr7:117413000-117417000 Enhancers Primary monocytes fromperipheralblood blood
38 chr7:117413200-117416800 Enhancers Primary hematopoietic stem cells short term culture blood
39 chr7:117413200-117417200 Weak transcription Fetal Kidney kidney
40 chr7:117413400-117416600 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
41 chr7:117413600-117415400 Weak transcription Brain Cingulate Gyrus brain
42 chr7:117413600-117416600 Weak transcription Fetal Brain Male brain
43 chr7:117413800-117415400 Weak transcription NHLF lung
44 chr7:117414400-117416000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
45 chr7:117414600-117415400 Enhancers Monocytes-CD14+_RO01746 blood
46 chr7:117414600-117415600 Weak transcription GM12878-XiMat blood
47 chr7:117414600-117416600 Weak transcription Brain Anterior Caudate brain
48 chr7:117414600-117416800 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
49 chr7:117414800-117415600 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
50 chr7:117415200-117415600 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived

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Last update: Aug 31, 2015