Variant report

Variant	rs363404
Chromosome Location	chr10:119009631-119009632
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 13 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:13)

rs_ID	r²[population]
rs11197932	0.96[AMR][1000 genomes];0.99[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs2283137	1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs3026047	0.84[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs363332	0.96[AMR][1000 genomes];0.99[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs363334	0.99[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs363337	0.96[AMR][1000 genomes];0.99[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs363340	0.82[EUR][1000 genomes]
rs363341	0.90[EUR][1000 genomes]
rs363371	0.84[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs363390	0.96[AMR][1000 genomes];0.98[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs363399	0.98[AMR][1000 genomes];0.99[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs4081624	0.82[EUR][1000 genomes]
rs60543597	0.92[AMR][1000 genomes];0.90[EUR][1000 genomes];0.86[ASN][1000 genomes]

No data

Chromatin state (count:18 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:119001600-119010200	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
2	chr10:119001600-119013400	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
3	chr10:119001800-119011800	Weak transcription	Ovary	ovary
4	chr10:119007800-119009800	Enhancers	Primary hematopoietic stem cells short term culture	blood
5	chr10:119008400-119009800	Enhancers	Primary T helper naive cells fromperipheralblood	blood
6	chr10:119008600-119009800	Enhancers	NHDF-Ad	bronchial
7	chr10:119008800-119009800	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--
8	chr10:119008800-119010400	Weak transcription	HUES48 Cell Line	embryonic stem cell
9	chr10:119009000-119010800	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
10	chr10:119009000-119011400	Enhancers	Primary T cells from cord blood	blood
11	chr10:119009000-119012400	Enhancers	Thymus	Thymus
12	chr10:119009000-119012600	Enhancers	Fetal Thymus	thymus
13	chr10:119009200-119017600	Weak transcription	Pancreatic Islets	Pancreatic Islet
14	chr10:119009600-119009800	Bivalent Enhancer	Primary neutrophils fromperipheralblood	blood
15	chr10:119009600-119009800	Bivalent Enhancer	Primary T cells fromperipheralblood	blood
16	chr10:119009600-119009800	Genic enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--
17	chr10:119009600-119011200	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
18	chr10:119009600-119018600	Weak transcription	Primary hematopoietic stem cells	blood

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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