Variant report

rSNPs within LD-proxies of this variant (count:20)

rs_ID	r²[population]
rs13176052	0.83[CHB][hapmap]
rs13184658	0.83[CHB][hapmap]
rs1457760	0.83[CHB][hapmap]
rs1457761	0.81[CHB][hapmap]
rs1457762	0.83[CHB][hapmap]
rs1496390	0.83[CHB][hapmap]
rs163302	0.82[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs168110	0.82[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs181949	0.85[CEU][hapmap];0.91[MEX][hapmap];0.89[TSI][hapmap];0.82[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs337689	0.83[CHB][hapmap]
rs337699	0.83[CHB][hapmap]
rs36938	0.92[CHB][hapmap];0.88[ASN][1000 genomes]
rs36945	0.91[MEX][hapmap];0.89[TSI][hapmap];0.82[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs36946	0.83[CHB][hapmap];0.95[CHD][hapmap];0.88[MEX][hapmap];0.84[ASN][1000 genomes]
rs36949	0.85[CEU][hapmap];0.87[MEX][hapmap];0.89[TSI][hapmap];0.86[EUR][1000 genomes]
rs36950	0.85[CEU][hapmap];0.87[MEX][hapmap];0.89[TSI][hapmap];0.86[EUR][1000 genomes]
rs36955	0.84[AMR][1000 genomes];0.86[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs36957	0.81[AMR][1000 genomes];0.93[ASN][1000 genomes]
rs388084	0.83[CHB][hapmap]
rs40179	0.82[AMR][1000 genomes];0.86[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1024203	chr5:113596392-113659935	Enhancers Weak transcription Flanking Active TSS Active TSS Bivalent Enhancer	Chromatin interactive region	n/a	inside rSNPs	diseases
2	nsv882728	chr5:113651694-113731423	Bivalent/Poised TSS Strong transcription Enhancers Flanking Bivalent TSS/Enh Flanking Active TSS Weak transcription Bivalent Enhancer Active TSS Genic enhancers ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr5:113657200-113660000	Weak transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
2	chr5:113657400-113660000	Weak transcription	HUVEC	blood vessel

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