Variant report

Variant	rs370884014
Chromosome Location	chrX:155104208-155104209
allele	-/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 23 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:23 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv532965	chrX:154418093-155226096	Weak transcription Enhancers Strong transcription Flanking Active TSS ZNF genes & repeats Genic enhancers Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	35 gene(s)	inside rSNPs	diseases
2	nsv532967	chrX:154418093-155252027	Strong transcription Active TSS Flanking Active TSS Enhancers ZNF genes & repeats Weak transcription Bivalent/Poised TSS Transcr. at gene 5' and 3' Bivalent Enhancer Genic enhancers Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	38 gene(s)	inside rSNPs	diseases
3	nsv915940	chrX:154577793-155232907	Weak transcription Active TSS ZNF genes & repeats Strong transcription Flanking Active TSS Enhancers Genic enhancers Bivalent Enhancer Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	22 gene(s)	inside rSNPs	diseases
4	nsv534441	chrX:154664337-155251871	Weak transcription Active TSS Strong transcription Bivalent/Poised TSS ZNF genes & repeats Enhancers Flanking Bivalent TSS/Enh Flanking Active TSS Bivalent Enhancer Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	20 gene(s)	inside rSNPs	diseases
5	nsv869305	chrX:154739403-155190347	ZNF genes & repeats Flanking Active TSS Enhancers Weak transcription Active TSS Strong transcription Genic enhancers Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	7 gene(s)	inside rSNPs	diseases
6	nsv916736	chrX:154762193-155232894	Bivalent/Poised TSS Active TSS Enhancers Weak transcription Strong transcription Flanking Active TSS ZNF genes & repeats Bivalent Enhancer Flanking Bivalent TSS/Enh Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	11 gene(s)	inside rSNPs	diseases
7	esv3441367	chrX:154906586-155188122	Weak transcription Enhancers ZNF genes & repeats Strong transcription Active TSS Genic enhancers Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS	TF binding region Chromatin interactive region lncRNA miRNA target site	5 gene(s)	inside rSNPs	diseases
8	esv3411323	chrX:154906586-155189683	Enhancers Active TSS Weak transcription Bivalent/Poised TSS Strong transcription Genic enhancers ZNF genes & repeats Bivalent Enhancer Flanking Active TSS Flanking Bivalent TSS/Enh	TF binding region Chromatin interactive region lncRNA miRNA target site	5 gene(s)	inside rSNPs	diseases
9	nsv529629	chrX:154908412-155181583	Weak transcription Flanking Active TSS ZNF genes & repeats Enhancers Strong transcription Bivalent Enhancer Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS Genic enhancers	TF binding region Chromatin interactive region lncRNA miRNA target site	5 gene(s)	inside rSNPs	diseases
10	nsv534220	chrX:154929220-155251871	Weak transcription Flanking Active TSS Active TSS Enhancers ZNF genes & repeats Strong transcription Flanking Bivalent TSS/Enh Genic enhancers Bivalent Enhancer Bivalent/Poised TSS	TF binding region lncRNA miRNA target site	10 gene(s)	inside rSNPs	diseases
11	nsv529342	chrX:154946830-155142026	Active TSS Weak transcription ZNF genes & repeats Enhancers Genic enhancers Strong transcription Bivalent Enhancer Bivalent/Poised TSS Flanking Active TSS Flanking Bivalent TSS/Enh	TF binding region lncRNA miRNA target site	4 gene(s)	inside rSNPs	n/a
12	nsv532993	chrX:154946830-155251871	ZNF genes & repeats Weak transcription Strong transcription Active TSS Enhancers Flanking Active TSS Bivalent Enhancer Bivalent/Poised TSS Genic enhancers Flanking Bivalent TSS/Enh	TF binding region lncRNA miRNA target site	10 gene(s)	inside rSNPs	diseases
13	esv3366519	chrX:154963291-155133665	Strong transcription Enhancers Weak transcription Active TSS ZNF genes & repeats Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS Genic enhancers	TF binding region lncRNA miRNA target site	4 gene(s)	inside rSNPs	n/a
14	nsv491852	chrX:154974667-155208354	Enhancers ZNF genes & repeats Flanking Bivalent TSS/Enh Flanking Active TSS Weak transcription Strong transcription Active TSS Bivalent/Poised TSS Genic enhancers Bivalent Enhancer	TF binding region lncRNA miRNA target site	4 gene(s)	inside rSNPs	n/a
15	nsv532994	chrX:154974667-155226096	Enhancers Active TSS Weak transcription ZNF genes & repeats Strong transcription Flanking Active TSS Genic enhancers Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region lncRNA miRNA target site	7 gene(s)	inside rSNPs	diseases
16	nsv497966	chrX:154974696-155226057	ZNF genes & repeats Strong transcription Weak transcription Active TSS Enhancers Flanking Active TSS Bivalent Enhancer Genic enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region lncRNA miRNA target site	7 gene(s)	inside rSNPs	diseases
17	nsv915617	chrX:154974696-155232894	Enhancers Weak transcription Strong transcription ZNF genes & repeats Active TSS Genic enhancers Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer	TF binding region lncRNA miRNA target site	8 gene(s)	inside rSNPs	diseases
18	nsv995130	chrX:155004881-155232907	ZNF genes & repeats Weak transcription Strong transcription Enhancers Flanking Active TSS Active TSS Genic enhancers Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region lncRNA miRNA target site	7 gene(s)	inside rSNPs	diseases
19	nsv916312	chrX:155005015-155120625	ZNF genes & repeats Active TSS Enhancers Strong transcription Flanking Active TSS Weak transcription Bivalent Enhancer Flanking Bivalent TSS/Enh Genic enhancers Bivalent/Poised TSS	TF binding region lncRNA	3 gene(s)	inside rSNPs	n/a
20	nsv532995	chrX:155011785-155196953	ZNF genes & repeats Weak transcription Active TSS Strong transcription Flanking Active TSS Flanking Bivalent TSS/Enh Enhancers Bivalent/Poised TSS Bivalent Enhancer Genic enhancers	TF binding region lncRNA miRNA target site	3 gene(s)	inside rSNPs	n/a
21	nsv869161	chrX:155029751-155232907	ZNF genes & repeats Weak transcription Active TSS Enhancers Flanking Active TSS Strong transcription Bivalent Enhancer Bivalent/Poised TSS Genic enhancers Flanking Bivalent TSS/Enh	TF binding region lncRNA miRNA target site	7 gene(s)	inside rSNPs	diseases
22	nsv529953	chrX:155058022-155209034	Weak transcription Active TSS ZNF genes & repeats Enhancers Strong transcription Flanking Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS Genic enhancers	TF binding region lncRNA miRNA target site	4 gene(s)	inside rSNPs	n/a
23	nsv868959	chrX:155074305-155232907	Active TSS Bivalent Enhancer Strong transcription Weak transcription ZNF genes & repeats Enhancers Flanking Active TSS Genic enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region lncRNA miRNA target site	6 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:32 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chrX:155103800-155105400	ZNF genes & repeats	Foreskin Keratinocyte Primary Cells skin03	Skin
2	chrX:155104000-155104600	Active TSS	Ganglion Eminence derived primary cultured neurospheres	brain
3	chrX:155104000-155104600	Active TSS	Brain Anterior Caudate	brain
4	chrX:155104000-155104600	Active TSS	Osteobl	bone
5	chrX:155104000-155104800	ZNF genes & repeats	Foreskin Fibroblast Primary Cells skin01	Skin
6	chrX:155104000-155104800	Active TSS	Ovary	ovary
7	chrX:155104200-155104400	Flanking Bivalent TSS/Enh	Primary monocytes fromperipheralblood	blood
8	chrX:155104200-155104400	Bivalent/Poised TSS	Duodenum Smooth Muscle	Duodenum
9	chrX:155104200-155104400	Bivalent Enhancer	Fetal Muscle Leg	muscle
10	chrX:155104200-155104600	Flanking Bivalent TSS/Enh	Primary hematopoietic stem cells G-CSF-mobilized Male	--
11	chrX:155104200-155104600	Bivalent/Poised TSS	Cortex derived primary cultured neurospheres	brain
12	chrX:155104200-155104600	Active TSS	Foreskin Fibroblast Primary Cells skin02	Skin
13	chrX:155104200-155104600	Bivalent/Poised TSS	Brain Hippocampus Middle	brain
14	chrX:155104200-155104600	Bivalent Enhancer	Lung	lung
15	chrX:155104200-155104600	Flanking Active TSS	Pancreas	Pancrea
16	chrX:155104200-155104600	Active TSS	Right Atrium	heart
17	chrX:155104200-155104600	Active TSS	HMEC	breast
18	chrX:155104200-155104600	Active TSS	HSMMtube	muscle
19	chrX:155104200-155104800	Flanking Bivalent TSS/Enh	IMR90 fetal lung fibroblasts Cell Line	lung
20	chrX:155104200-155104800	Active TSS	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
21	chrX:155104200-155104800	Active TSS	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
22	chrX:155104200-155104800	Bivalent Enhancer	Primary T cells fromperipheralblood	blood
23	chrX:155104200-155104800	Bivalent/Poised TSS	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
24	chrX:155104200-155104800	Active TSS	Muscle Satellite Cultured Cells	--
25	chrX:155104200-155104800	Bivalent/Poised TSS	Brain Angular Gyrus	brain
26	chrX:155104200-155104800	Active TSS	Brain Dorsolateral Prefrontal Cortex	brain
27	chrX:155104200-155104800	Bivalent/Poised TSS	A549	lung
28	chrX:155104200-155104800	Active TSS	HepG2	liver
29	chrX:155104200-155104800	Active TSS	NHDF-Ad	bronchial
30	chrX:155104200-155104800	Active TSS	NHLF	lung
31	chrX:155104200-155105000	Active TSS	HUES6 Cell Line	embryonic stem cell
32	chrX:155104200-155105000	Active TSS	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links