The 2.0 version of rSNPBase

Variant report

Variant rs372346
Chromosome Location chr2:7173838-7173839
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:95 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:7151200-7185200 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
2 chr2:7152600-7192400 Weak transcription ES-I3 Cell Line embryonic stem cell
3 chr2:7154000-7183200 Strong transcription Primary T cells from cord blood blood
4 chr2:7154000-7190200 Strong transcription Dnd41 blood
5 chr2:7154600-7174800 Weak transcription Primary B cells from cord blood blood
6 chr2:7154600-7184200 Weak transcription HUES48 Cell Line embryonic stem cell
7 chr2:7155200-7182000 Strong transcription Primary T helper naive cells fromperipheralblood blood
8 chr2:7155600-7178800 Strong transcription Primary T helper cells PMA-I stimulated --
9 chr2:7157000-7177600 Strong transcription Primary mononuclear cells fromperipheralblood Blood
10 chr2:7157000-7179200 Weak transcription Aorta Aorta
11 chr2:7157200-7185200 Strong transcription Primary hematopoietic stem cells short term culture blood
12 chr2:7158200-7188800 Weak transcription iPS-18 Cell Line embryonic stem cell
13 chr2:7158400-7186800 Weak transcription Placenta Amnion Placenta Amnion
14 chr2:7159000-7181000 Strong transcription Ganglion Eminence derived primary cultured neurospheres brain
15 chr2:7159400-7186800 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
16 chr2:7159600-7180600 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
17 chr2:7163200-7177400 Weak transcription Fetal Brain Male brain
18 chr2:7164000-7177600 Weak transcription NHDF-Ad bronchial
19 chr2:7164000-7178000 Weak transcription K562 blood
20 chr2:7164600-7182200 Weak transcription Small Intestine intestine
21 chr2:7164800-7189000 Weak transcription H1 Cell Line embryonic stem cell
22 chr2:7165400-7179200 Weak transcription Colonic Mucosa Colon
23 chr2:7166800-7176400 Strong transcription Brain Germinal Matrix brain
24 chr2:7166800-7177800 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
25 chr2:7167000-7177800 Strong transcription Breast Myoepithelial Primary Cells Breast
26 chr2:7167400-7176600 Strong transcription Foreskin Melanocyte Primary Cells skin01 Skin
27 chr2:7167400-7200400 Weak transcription Rectal Smooth Muscle rectum
28 chr2:7167800-7175600 Genic enhancers Fetal Adrenal Gland Adrenal Gland
29 chr2:7167800-7182800 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
30 chr2:7168000-7180000 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
31 chr2:7168000-7185400 Weak transcription Rectal Mucosa Donor 29 rectum
32 chr2:7168400-7174200 Strong transcription Ovary ovary
33 chr2:7168400-7177000 Strong transcription Fetal Brain Female brain
34 chr2:7168600-7175800 Genic enhancers Spleen Spleen
35 chr2:7168800-7174000 Strong transcription Cortex derived primary cultured neurospheres brain
36 chr2:7168800-7176400 Strong transcription Fetal Stomach stomach
37 chr2:7169600-7184200 Weak transcription Duodenum Smooth Muscle Duodenum
38 chr2:7169800-7174200 Strong transcription Primary T cells effector/memory enriched fromperipheralblood blood
39 chr2:7169800-7174200 Strong transcription Esophagus oesophagus
40 chr2:7169800-7177200 Weak transcription Right Atrium heart
41 chr2:7170200-7174000 Strong transcription Brain Anterior Caudate brain
42 chr2:7170400-7177200 Strong transcription Brain Hippocampus Middle brain
43 chr2:7170800-7174000 Strong transcription Brain Angular Gyrus brain
44 chr2:7170800-7174200 Strong transcription Brain Dorsolateral Prefrontal Cortex brain
45 chr2:7170800-7187600 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
46 chr2:7171000-7174800 Genic enhancers Fetal Muscle Trunk muscle
47 chr2:7171200-7174000 Strong transcription Colon Smooth Muscle Colon
48 chr2:7171200-7174800 Strong transcription Primary T regulatory cells fromperipheralblood blood
49 chr2:7171400-7174600 Strong transcription Left Ventricle heart
50 chr2:7171600-7179600 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived

Quick Search:


  
Input of quick search could be:

what's new

Quick links

Copyright © 2015, Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences. All Rights Reserved Feedback
Last update: Aug 31, 2015