The 2.0 version of rSNPBase

Variant report

Variant rs399101
Chromosome Location chr2:7177924-7177925
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:94 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:7151200-7185200 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
2 chr2:7152600-7192400 Weak transcription ES-I3 Cell Line embryonic stem cell
3 chr2:7154000-7183200 Strong transcription Primary T cells from cord blood blood
4 chr2:7154000-7190200 Strong transcription Dnd41 blood
5 chr2:7154600-7184200 Weak transcription HUES48 Cell Line embryonic stem cell
6 chr2:7155200-7182000 Strong transcription Primary T helper naive cells fromperipheralblood blood
7 chr2:7155600-7178800 Strong transcription Primary T helper cells PMA-I stimulated --
8 chr2:7157000-7179200 Weak transcription Aorta Aorta
9 chr2:7157200-7185200 Strong transcription Primary hematopoietic stem cells short term culture blood
10 chr2:7158200-7188800 Weak transcription iPS-18 Cell Line embryonic stem cell
11 chr2:7158400-7186800 Weak transcription Placenta Amnion Placenta Amnion
12 chr2:7159000-7181000 Strong transcription Ganglion Eminence derived primary cultured neurospheres brain
13 chr2:7159400-7186800 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
14 chr2:7159600-7180600 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
15 chr2:7164000-7178000 Weak transcription K562 blood
16 chr2:7164600-7182200 Weak transcription Small Intestine intestine
17 chr2:7164800-7189000 Weak transcription H1 Cell Line embryonic stem cell
18 chr2:7165400-7179200 Weak transcription Colonic Mucosa Colon
19 chr2:7167400-7200400 Weak transcription Rectal Smooth Muscle rectum
20 chr2:7167800-7182800 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
21 chr2:7168000-7180000 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
22 chr2:7168000-7185400 Weak transcription Rectal Mucosa Donor 29 rectum
23 chr2:7169600-7184200 Weak transcription Duodenum Smooth Muscle Duodenum
24 chr2:7170800-7187600 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
25 chr2:7171600-7179600 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
26 chr2:7172000-7191200 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
27 chr2:7172200-7178800 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
28 chr2:7172200-7179600 Weak transcription Placenta Placenta
29 chr2:7172200-7184200 Weak transcription Gastric stomach
30 chr2:7172200-7186400 Weak transcription Primary monocytes fromperipheralblood blood
31 chr2:7172200-7197200 Weak transcription Primary T helper 17 cells PMA-I stimulated --
32 chr2:7172400-7178000 Weak transcription Monocytes-CD14+_RO01746 blood
33 chr2:7172400-7184400 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
34 chr2:7172600-7182200 Strong transcription Primary T cells fromperipheralblood blood
35 chr2:7173200-7180600 Strong transcription Fetal Muscle Leg muscle
36 chr2:7173200-7183000 Weak transcription iPS-20b Cell Line embryonic stem cell
37 chr2:7173400-7179600 Weak transcription HUES64 Cell Line embryonic stem cell
38 chr2:7173400-7180600 Weak transcription Stomach Smooth Muscle stomach
39 chr2:7173400-7183600 Weak transcription H9 Cell Line embryonic stem cell
40 chr2:7173600-7179400 Weak transcription Skeletal Muscle Female skeletal muscle
41 chr2:7173600-7179600 Weak transcription Sigmoid Colon Sigmoid Colon
42 chr2:7173600-7180000 Weak transcription Primary T helper naive cells from peripheral blood blood
43 chr2:7173600-7184200 Weak transcription Thymus Thymus
44 chr2:7173600-7189200 Weak transcription HUES6 Cell Line embryonic stem cell
45 chr2:7173800-7188600 Weak transcription Primary T killer memory cells from peripheral blood blood
46 chr2:7174200-7179600 Weak transcription Esophagus oesophagus
47 chr2:7174200-7184600 Weak transcription Duodenum Mucosa Duodenum
48 chr2:7174600-7179600 Weak transcription Right Ventricle heart
49 chr2:7174800-7178800 Strong transcription Fetal Muscle Trunk muscle
50 chr2:7174800-7195200 Weak transcription Primary T regulatory cells fromperipheralblood blood

Quick Search:


  
Input of quick search could be:

what's new

Quick links

Copyright © 2015, Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences. All Rights Reserved Feedback
Last update: Aug 31, 2015