Variant report

Variant rs3734449
Chromosome Location chr6:127797341-127797342
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:65 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:127780400-127803800 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
2 chr6:127780600-127804400 Weak transcription Right Atrium heart
3 chr6:127781000-127804800 Weak transcription Duodenum Smooth Muscle Duodenum
4 chr6:127783800-127805000 Strong transcription Fetal Brain Female brain
5 chr6:127786600-127801600 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
6 chr6:127786600-127805200 Weak transcription Stomach Smooth Muscle stomach
7 chr6:127786800-127804800 Weak transcription Colon Smooth Muscle Colon
8 chr6:127789400-127802200 Strong transcription Ganglion Eminence derived primary cultured neurospheres brain
9 chr6:127790200-127801200 Strong transcription Cortex derived primary cultured neurospheres brain
10 chr6:127790800-127802200 Strong transcription iPS-18 Cell Line embryonic stem cell
11 chr6:127791200-127804800 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
12 chr6:127791600-127802200 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
13 chr6:127793600-127797400 Weak transcription NH-A brain
14 chr6:127793600-127801600 Weak transcription Osteobl bone
15 chr6:127793600-127802200 Weak transcription HSMM muscle
16 chr6:127793600-127804400 Weak transcription A549 lung
17 chr6:127793600-127804400 Weak transcription HSMMtube muscle
18 chr6:127793600-127804600 Weak transcription NHDF-Ad bronchial
19 chr6:127793600-127805000 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
20 chr6:127793800-127797400 Strong transcription HUES64 Cell Line embryonic stem cell
21 chr6:127793800-127804600 Weak transcription Primary T regulatory cells fromperipheralblood blood
22 chr6:127794200-127798200 Strong transcription HUES48 Cell Line embryonic stem cell
23 chr6:127794600-127804600 Weak transcription Primary T helper cells fromperipheralblood blood
24 chr6:127794800-127797800 Strong transcription Brain Inferior Temporal Lobe brain
25 chr6:127795000-127797400 Strong transcription H1 Cell Line embryonic stem cell
26 chr6:127795000-127797600 Strong transcription Fetal Stomach stomach
27 chr6:127795000-127800000 Strong transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
28 chr6:127795200-127801200 Weak transcription Fetal Brain Male brain
29 chr6:127795200-127804600 Weak transcription Dnd41 blood
30 chr6:127795400-127802400 Weak transcription iPS-15b Cell Line embryonic stem cell
31 chr6:127795400-127803000 Strong transcription Breast Myoepithelial Primary Cells Breast
32 chr6:127795600-127797400 Strong transcription Brain Substantia Nigra brain
33 chr6:127795600-127797600 Strong transcription ES-UCSF4 Cell Line embryonic stem cell
34 chr6:127795800-127797400 Strong transcription Muscle Satellite Cultured Cells --
35 chr6:127795800-127797400 Strong transcription Ovary ovary
36 chr6:127795800-127800400 Strong transcription Brain Angular Gyrus brain
37 chr6:127796000-127797400 Strong transcription Brain Hippocampus Middle brain
38 chr6:127796000-127797600 Strong transcription Brain Anterior Caudate brain
39 chr6:127796000-127802200 Strong transcription iPS-20b Cell Line embryonic stem cell
40 chr6:127796200-127797400 Strong transcription IMR90 fetal lung fibroblasts Cell Line lung
41 chr6:127796200-127797400 ZNF genes & repeats Foreskin Fibroblast Primary Cells skin01 Skin
42 chr6:127796200-127797400 ZNF genes & repeats Foreskin Melanocyte Primary Cells skin01 Skin
43 chr6:127796200-127797400 Strong transcription Pancreatic Islets Pancreatic Islet
44 chr6:127796200-127797400 Strong transcription NHLF lung
45 chr6:127796200-127797600 Strong transcription H9 Cell Line embryonic stem cell
46 chr6:127796200-127797600 Strong transcription Brain Cingulate Gyrus brain
47 chr6:127796400-127797400 ZNF genes & repeats H9 Derived Neuron Cultured Cells ES cell derived
48 chr6:127796400-127797400 Strong transcription Brain Dorsolateral Prefrontal Cortex brain
49 chr6:127796400-127797400 ZNF genes & repeats Spleen Spleen
50 chr6:127796600-127797400 Strong transcription HUES6 Cell Line embryonic stem cell

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