The 2.0 version of rSNPBase

Variant report

Variant rs3757000
Chromosome Location chr6:127774027-127774028
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:58 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:127757000-127778800 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
2 chr6:127758200-127780000 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
3 chr6:127758200-127794800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
4 chr6:127758400-127775800 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
5 chr6:127758600-127778400 Weak transcription NHDF-Ad bronchial
6 chr6:127759800-127779600 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
7 chr6:127761200-127775000 Weak transcription Psoas Muscle Psoas
8 chr6:127761600-127778800 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
9 chr6:127762000-127780000 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
10 chr6:127763400-127778000 Weak transcription Osteobl bone
11 chr6:127763800-127778000 Weak transcription HUES64 Cell Line embryonic stem cell
12 chr6:127763800-127780000 Weak transcription Lung lung
13 chr6:127764000-127778400 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
14 chr6:127764200-127780000 Weak transcription Brain Anterior Caudate brain
15 chr6:127764800-127780200 Weak transcription Brain Inferior Temporal Lobe brain
16 chr6:127766200-127774400 Strong transcription Cortex derived primary cultured neurospheres brain
17 chr6:127766400-127774400 Weak transcription Pancreatic Islets Pancreatic Islet
18 chr6:127767400-127775400 Strong transcription Brain Germinal Matrix brain
19 chr6:127768000-127777800 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
20 chr6:127768200-127779600 Weak transcription Brain Substantia Nigra brain
21 chr6:127768400-127774200 Weak transcription Skeletal Muscle Male skeletal muscle
22 chr6:127768400-127778000 Weak transcription HSMM muscle
23 chr6:127768400-127780200 Weak transcription Brain Angular Gyrus brain
24 chr6:127768600-127777600 Weak transcription HUES48 Cell Line embryonic stem cell
25 chr6:127768600-127778000 Weak transcription H1 Cell Line embryonic stem cell
26 chr6:127768600-127778400 Weak transcription Brain Hippocampus Middle brain
27 chr6:127768600-127778600 Weak transcription H9 Cell Line embryonic stem cell
28 chr6:127768600-127779800 Weak transcription Aorta Aorta
29 chr6:127768600-127779800 Weak transcription Ovary ovary
30 chr6:127768800-127777400 Weak transcription Muscle Satellite Cultured Cells --
31 chr6:127768800-127777400 Weak transcription Fetal Muscle Leg muscle
32 chr6:127768800-127780200 Weak transcription Brain Cingulate Gyrus brain
33 chr6:127769200-127775000 Weak transcription Fetal Brain Male brain
34 chr6:127769200-127790800 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
35 chr6:127769200-127795400 Weak transcription Breast Myoepithelial Primary Cells Breast
36 chr6:127771200-127775600 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
37 chr6:127771200-127778400 Weak transcription Fetal Muscle Trunk muscle
38 chr6:127771400-127774200 Weak transcription Adipose Nuclei Adipose
39 chr6:127771400-127775600 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
40 chr6:127771400-127778600 Weak transcription iPS-18 Cell Line embryonic stem cell
41 chr6:127771400-127793000 Weak transcription A549 lung
42 chr6:127771400-127795000 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
43 chr6:127771400-127795800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
44 chr6:127771600-127779200 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
45 chr6:127771600-127779600 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
46 chr6:127771800-127778400 Weak transcription Right Atrium heart
47 chr6:127771800-127778400 Weak transcription NH-A brain
48 chr6:127772000-127777600 Weak transcription iPS-20b Cell Line embryonic stem cell
49 chr6:127772200-127774600 Enhancers Colon Smooth Muscle Colon
50 chr6:127772200-127778400 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain

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Last update: Aug 31, 2015