Variant report
| Variant | rs11154414 |
|---|---|
| Chromosome Location | chr6:127813913-127813914 |
| allele | C/T |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr6:127806400-127815600 | Weak transcription | Primary T helper 17 cells PMA-I stimulated | -- |
| 2 | chr6:127806600-127815200 | Weak transcription | Primary T helper memory cells from peripheral blood 2 | blood |
| 3 | chr6:127806800-127829800 | Weak transcription | Adipose Derived Mesenchymal Stem Cell Cultured Cells | ES cell derived |
| 4 | chr6:127806800-127829800 | Weak transcription | Muscle Satellite Cultured Cells | -- |
| 5 | chr6:127808400-127826000 | Weak transcription | Brain Anterior Caudate | brain |
| 6 | chr6:127808400-127834600 | Weak transcription | ES-I3 Cell Line | embryonic stem cell |
| 7 | chr6:127809000-127834000 | Weak transcription | Brain Dorsolateral Prefrontal Cortex | brain |
| 8 | chr6:127809200-127830200 | Weak transcription | Brain Inferior Temporal Lobe | brain |
| 9 | chr6:127809400-127820800 | Weak transcription | Fetal Brain Male | brain |
| 10 | chr6:127809400-127835400 | Weak transcription | Brain Cingulate Gyrus | brain |
| 11 | chr6:127810600-127814000 | ZNF genes & repeats | H9 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
| 12 | chr6:127811400-127831400 | Weak transcription | Brain Hippocampus Middle | brain |
| 13 | chr6:127811600-127831800 | Weak transcription | Brain Angular Gyrus | brain |
| 14 | chr6:127811800-127814000 | Strong transcription | H1 Derived Mesenchymal Stem Cells | ES cell derived |
| 15 | chr6:127812000-127817600 | Weak transcription | Pancreatic Islets | Pancreatic Islet |
| 16 | chr6:127812200-127814000 | Strong transcription | hESC Derived CD56+ Mesoderm Cultured Cells | ES cell derived |
| 17 | chr6:127812200-127814000 | Strong transcription | Fetal Brain Female | brain |
| 18 | chr6:127812200-127821600 | Strong transcription | Brain Germinal Matrix | brain |
| 19 | chr6:127812200-127831200 | Weak transcription | HUES48 Cell Line | embryonic stem cell |
| 20 | chr6:127812400-127826000 | Weak transcription | iPS-20b Cell Line | embryonic stem cell |
| 21 | chr6:127812400-127829600 | Weak transcription | iPS-18 Cell Line | embryonic stem cell |
| 22 | chr6:127812600-127815000 | Weak transcription | Foreskin Melanocyte Primary Cells skin03 | Skin |
| 23 | chr6:127812600-127826000 | Weak transcription | A549 | lung |
| 24 | chr6:127812600-127826200 | Weak transcription | NH-A | brain |
| 25 | chr6:127812600-127830000 | Weak transcription | hESC Derived CD56+ Ectoderm Cultured Cells | ES cell derived |
| 26 | chr6:127812600-127831400 | Weak transcription | H9 Cell Line | embryonic stem cell |
| 27 | chr6:127812800-127826000 | Weak transcription | H1 Cell Line | embryonic stem cell |
| 28 | chr6:127813000-127830000 | Weak transcription | Breast Myoepithelial Primary Cells | Breast |
| 29 | chr6:127813000-127832000 | Weak transcription | ES-UCSF4 Cell Line | embryonic stem cell |
| 30 | chr6:127813400-127815000 | Weak transcription | Ganglion Eminence derived primary cultured neurospheres | brain |
| 31 | chr6:127813400-127823400 | Weak transcription | Cortex derived primary cultured neurospheres | brain |
| 32 | chr6:127813400-127826200 | Weak transcription | H1 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
| 33 | chr6:127813400-127829600 | Weak transcription | HUES64 Cell Line | embryonic stem cell |
| 34 | chr6:127813400-127831400 | Strong transcription | H9 Derived Neuron Cultured Cells | ES cell derived |
