The 2.0 version of rSNPBase

Variant report

Variant rs41285272
Chromosome Location chr6:127794289-127794290
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:55 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:127758200-127794800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
2 chr6:127769200-127795400 Weak transcription Breast Myoepithelial Primary Cells Breast
3 chr6:127771400-127795000 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
4 chr6:127771400-127795800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
5 chr6:127780400-127796200 Weak transcription H9 Cell Line embryonic stem cell
6 chr6:127780400-127803800 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
7 chr6:127780600-127795000 Weak transcription H1 Cell Line embryonic stem cell
8 chr6:127780600-127795600 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
9 chr6:127780600-127795800 Weak transcription Brain Angular Gyrus brain
10 chr6:127780600-127795800 Weak transcription Ovary ovary
11 chr6:127780600-127796400 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
12 chr6:127780600-127804400 Weak transcription Right Atrium heart
13 chr6:127780800-127796400 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
14 chr6:127780800-127796400 Weak transcription Fetal Adrenal Gland Adrenal Gland
15 chr6:127781000-127804800 Weak transcription Duodenum Smooth Muscle Duodenum
16 chr6:127781200-127795600 Weak transcription Brain Substantia Nigra brain
17 chr6:127781400-127794800 Weak transcription Brain Hippocampus Middle brain
18 chr6:127783800-127805000 Strong transcription Fetal Brain Female brain
19 chr6:127785800-127796400 Weak transcription Fetal Lung lung
20 chr6:127786600-127796200 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
21 chr6:127786600-127796400 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
22 chr6:127786600-127801600 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
23 chr6:127786600-127805200 Weak transcription Stomach Smooth Muscle stomach
24 chr6:127786800-127796200 Weak transcription NHLF lung
25 chr6:127786800-127804800 Weak transcription Colon Smooth Muscle Colon
26 chr6:127787000-127797200 Weak transcription Fetal Muscle Leg muscle
27 chr6:127787800-127795000 Weak transcription Fetal Stomach stomach
28 chr6:127788400-127796200 Weak transcription Pancreatic Islets Pancreatic Islet
29 chr6:127789400-127802200 Strong transcription Ganglion Eminence derived primary cultured neurospheres brain
30 chr6:127790200-127801200 Strong transcription Cortex derived primary cultured neurospheres brain
31 chr6:127790800-127802200 Strong transcription iPS-18 Cell Line embryonic stem cell
32 chr6:127791200-127795600 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
33 chr6:127791200-127796800 Weak transcription Primary T helper 17 cells PMA-I stimulated --
34 chr6:127791200-127804800 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
35 chr6:127791400-127795200 Strong transcription iPS-20b Cell Line embryonic stem cell
36 chr6:127791600-127794800 Weak transcription Brain Inferior Temporal Lobe brain
37 chr6:127791600-127802200 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
38 chr6:127792200-127796200 Weak transcription Brain Cingulate Gyrus brain
39 chr6:127792600-127796000 Weak transcription Brain Anterior Caudate brain
40 chr6:127792800-127796200 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
41 chr6:127793000-127795000 Strong transcription Fetal Brain Male brain
42 chr6:127793200-127794800 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
43 chr6:127793600-127796200 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
44 chr6:127793600-127797400 Weak transcription NH-A brain
45 chr6:127793600-127801600 Weak transcription Osteobl bone
46 chr6:127793600-127802200 Weak transcription HSMM muscle
47 chr6:127793600-127804400 Weak transcription A549 lung
48 chr6:127793600-127804400 Weak transcription HSMMtube muscle
49 chr6:127793600-127804600 Weak transcription NHDF-Ad bronchial
50 chr6:127793600-127805000 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell

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Last update: Aug 31, 2015