Variant report

Variant	rs9321092
Chromosome Location	chr6:127814881-127814882
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr6:127812912..127815334-chr6:127821347..127823179,2	K562	blood:

Extended variants
information (count: 44 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:44)

rs_ID	r²[population]
rs10457501	0.90[AMR][1000 genomes];0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1080436	1.00[CHD][hapmap]
rs10872319	0.87[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs11154410	0.96[CEU][hapmap];1.00[CHB][hapmap];0.90[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11154413	0.96[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];0.84[GIH][hapmap];0.87[MEX][hapmap];0.82[MKK][hapmap];0.93[TSI][hapmap];0.83[AMR][1000 genomes];0.93[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11154414	0.88[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs1154642	1.00[CHB][hapmap]
rs11759744	1.00[ASN][1000 genomes]
rs11962618	1.00[CHB][hapmap];1.00[ASN][1000 genomes]
rs11965031	0.90[AMR][1000 genomes];0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11967682	0.85[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs12194762	0.83[AMR][1000 genomes];0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs13193647	1.00[ASN][1000 genomes]
rs13194028	1.00[ASN][1000 genomes]
rs13194280	1.00[CHB][hapmap]
rs13207650	1.00[ASN][1000 genomes]
rs1374983	1.00[CHD][hapmap]
rs17205908	1.00[CHD][hapmap]
rs17272843	0.84[AMR][1000 genomes];0.90[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1949173	1.00[CHD][hapmap]
rs2221878	1.00[CHD][hapmap]
rs34239340	1.00[ASN][1000 genomes]
rs34362686	1.00[ASN][1000 genomes]
rs35237558	1.00[ASN][1000 genomes]
rs36000432	1.00[ASN][1000 genomes]
rs41285272	0.83[AMR][1000 genomes];0.93[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4321843	1.00[ASN][1000 genomes]
rs4476846	1.00[CHB][hapmap]
rs500192	1.00[CHD][hapmap]
rs579177	1.00[CHD][hapmap]
rs6569497	1.00[CHD][hapmap]
rs6569504	1.00[CHD][hapmap]
rs6909829	0.96[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];0.89[GIH][hapmap];0.86[MEX][hapmap];0.83[MKK][hapmap];0.95[TSI][hapmap];0.87[AMR][1000 genomes];0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6910292	0.84[AMR][1000 genomes];0.90[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6913216	0.96[CEU][hapmap];0.80[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs6914921	1.00[ASN][1000 genomes]
rs6932990	1.00[ASN][1000 genomes]
rs6936370	0.96[CEU][hapmap];0.80[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs6937964	0.87[AMR][1000 genomes];0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6939662	1.00[CHB][hapmap];1.00[ASN][1000 genomes]
rs7761452	1.00[CHB][hapmap];1.00[ASN][1000 genomes]
rs7766903	1.00[CHB][hapmap]
rs9388581	0.90[AMR][1000 genomes];0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9401964	0.90[AMR][1000 genomes];0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]

No data

Chromatin state (count:34 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:127806400-127815600	Weak transcription	Primary T helper 17 cells PMA-I stimulated	--
2	chr6:127806600-127815200	Weak transcription	Primary T helper memory cells from peripheral blood 2	blood
3	chr6:127806800-127829800	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
4	chr6:127806800-127829800	Weak transcription	Muscle Satellite Cultured Cells	--
5	chr6:127808400-127826000	Weak transcription	Brain Anterior Caudate	brain
6	chr6:127808400-127834600	Weak transcription	ES-I3 Cell Line	embryonic stem cell
7	chr6:127809000-127834000	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
8	chr6:127809200-127830200	Weak transcription	Brain Inferior Temporal Lobe	brain
9	chr6:127809400-127820800	Weak transcription	Fetal Brain Male	brain
10	chr6:127809400-127835400	Weak transcription	Brain Cingulate Gyrus	brain
11	chr6:127811400-127831400	Weak transcription	Brain Hippocampus Middle	brain
12	chr6:127811600-127831800	Weak transcription	Brain Angular Gyrus	brain
13	chr6:127812000-127817600	Weak transcription	Pancreatic Islets	Pancreatic Islet
14	chr6:127812200-127821600	Strong transcription	Brain Germinal Matrix	brain
15	chr6:127812200-127831200	Weak transcription	HUES48 Cell Line	embryonic stem cell
16	chr6:127812400-127826000	Weak transcription	iPS-20b Cell Line	embryonic stem cell
17	chr6:127812400-127829600	Weak transcription	iPS-18 Cell Line	embryonic stem cell
18	chr6:127812600-127815000	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
19	chr6:127812600-127826000	Weak transcription	A549	lung
20	chr6:127812600-127826200	Weak transcription	NH-A	brain
21	chr6:127812600-127830000	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
22	chr6:127812600-127831400	Weak transcription	H9 Cell Line	embryonic stem cell
23	chr6:127812800-127826000	Weak transcription	H1 Cell Line	embryonic stem cell
24	chr6:127813000-127830000	Weak transcription	Breast Myoepithelial Primary Cells	Breast
25	chr6:127813000-127832000	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
26	chr6:127813400-127815000	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
27	chr6:127813400-127823400	Weak transcription	Cortex derived primary cultured neurospheres	brain
28	chr6:127813400-127826200	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
29	chr6:127813400-127829600	Weak transcription	HUES64 Cell Line	embryonic stem cell
30	chr6:127813400-127831400	Strong transcription	H9 Derived Neuron Cultured Cells	ES cell derived
31	chr6:127814000-127818000	Weak transcription	Fetal Brain Female	brain
32	chr6:127814000-127818400	Weak transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
33	chr6:127814000-127830800	Strong transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
34	chr6:127814000-127835600	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived

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