Variant report

Variant rs373579
Chromosome Location chr1:161483484-161483485
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:44 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:161477400-161488200 Weak transcription Primary hematopoietic stem cells short term culture blood
2 chr1:161477600-161493600 Weak transcription Duodenum Smooth Muscle Duodenum
3 chr1:161480400-161483800 Enhancers Brain Cingulate Gyrus brain
4 chr1:161481000-161483600 Enhancers Brain Hippocampus Middle brain
5 chr1:161481400-161483600 Weak transcription Fetal Lung lung
6 chr1:161481800-161493800 Weak transcription Spleen Spleen
7 chr1:161482000-161486400 Genic enhancers Primary neutrophils fromperipheralblood blood
8 chr1:161482200-161483600 Enhancers Foreskin Melanocyte Primary Cells skin01 Skin
9 chr1:161482200-161483800 Enhancers Brain Substantia Nigra brain
10 chr1:161482200-161483800 Enhancers Duodenum Mucosa Duodenum
11 chr1:161482400-161483600 Enhancers Brain Angular Gyrus brain
12 chr1:161482400-161483800 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
13 chr1:161482400-161483800 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
14 chr1:161482400-161483800 Enhancers Brain Inferior Temporal Lobe brain
15 chr1:161482400-161484000 Enhancers Hela-S3 cervix
16 chr1:161482400-161484000 Enhancers NHLF lung
17 chr1:161482400-161484000 Enhancers Osteobl bone
18 chr1:161482400-161484200 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
19 chr1:161482400-161484200 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
20 chr1:161482600-161483600 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
21 chr1:161482600-161483600 Enhancers Cortex derived primary cultured neurospheres brain
22 chr1:161482600-161483800 Enhancers Skeletal Muscle Female skeletal muscle
23 chr1:161482600-161483800 Enhancers Stomach Smooth Muscle stomach
24 chr1:161482600-161484200 Enhancers Colon Smooth Muscle Colon
25 chr1:161482800-161483600 Weak transcription iPS-18 Cell Line embryonic stem cell
26 chr1:161482800-161485600 Strong transcription Monocytes-CD14+_RO01746 blood
27 chr1:161482800-161493200 Strong transcription Primary monocytes fromperipheralblood blood
28 chr1:161482800-161493400 Weak transcription Adipose Nuclei Adipose
29 chr1:161482800-161493600 Weak transcription Colonic Mucosa Colon
30 chr1:161483000-161483600 Weak transcription Fetal Muscle Leg muscle
31 chr1:161483000-161493800 Weak transcription Primary mononuclear cells fromperipheralblood Blood
32 chr1:161483200-161483600 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
33 chr1:161483200-161483800 Enhancers Fetal Intestine Large intestine
34 chr1:161483200-161483800 Enhancers Placenta Placenta
35 chr1:161483200-161483800 Enhancers Lung lung
36 chr1:161483400-161483600 Enhancers Fetal Adrenal Gland Adrenal Gland
37 chr1:161483400-161483600 Enhancers Rectal Mucosa Donor 31 rectum
38 chr1:161483400-161483800 Enhancers HUES6 Cell Line embryonic stem cell
39 chr1:161483400-161483800 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
40 chr1:161483400-161483800 Enhancers Gastric stomach
41 chr1:161483400-161483800 Enhancers Pancreas Pancrea
42 chr1:161483400-161483800 Flanking Active TSS HepG2 liver
43 chr1:161483400-161484000 Enhancers Stomach Mucosa stomach
44 chr1:161483400-161484000 Genic enhancers K562 blood

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