Variant report

Variant rs7515174
Chromosome Location chr1:161476949-161476950
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:55 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:161474400-161477000 Flanking Active TSS Primary neutrophils fromperipheralblood blood
2 chr1:161474400-161477600 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
3 chr1:161475000-161477000 Enhancers GM12878-XiMat blood
4 chr1:161475000-161477200 Flanking Active TSS Monocytes-CD14+_RO01746 blood
5 chr1:161475200-161477000 Active TSS Brain Substantia Nigra brain
6 chr1:161475200-161477000 Enhancers Lung lung
7 chr1:161475200-161477400 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
8 chr1:161475200-161477400 Active TSS Brain Anterior Caudate brain
9 chr1:161475200-161477400 Enhancers Fetal Thymus thymus
10 chr1:161475200-161477600 Active TSS Duodenum Smooth Muscle Duodenum
11 chr1:161475400-161477000 Enhancers HUVEC blood vessel
12 chr1:161475400-161477200 Flanking Active TSS Primary hematopoietic stem cells short term culture blood
13 chr1:161475400-161477400 Active TSS Brain Hippocampus Middle brain
14 chr1:161475400-161477600 Active TSS Rectal Mucosa Donor 29 rectum
15 chr1:161475600-161477000 Active TSS Primary mononuclear cells fromperipheralblood Blood
16 chr1:161475600-161477000 Active TSS Brain Cingulate Gyrus brain
17 chr1:161475600-161477400 Enhancers Foreskin Melanocyte Primary Cells skin01 Skin
18 chr1:161475600-161477400 Transcr. at gene 5' and 3' K562 blood
19 chr1:161476000-161477400 Enhancers Cortex derived primary cultured neurospheres brain
20 chr1:161476200-161477200 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
21 chr1:161476200-161477200 Active TSS Adipose Nuclei Adipose
22 chr1:161476200-161477400 Enhancers Spleen Spleen
23 chr1:161476200-161478200 Active TSS Primary B cells from cord blood blood
24 chr1:161476200-161482400 Weak transcription Colonic Mucosa Colon
25 chr1:161476400-161477000 Enhancers iPS-20b Cell Line embryonic stem cell
26 chr1:161476400-161477000 Enhancers ES-UCSF4 Cell Line embryonic stem cell
27 chr1:161476400-161477000 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
28 chr1:161476400-161477000 Enhancers Hela-S3 cervix
29 chr1:161476400-161477000 Enhancers Osteobl bone
30 chr1:161476400-161477200 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
31 chr1:161476400-161477200 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
32 chr1:161476400-161477200 Flanking Active TSS Primary hematopoietic stem cells blood
33 chr1:161476400-161477200 Enhancers Fetal Lung lung
34 chr1:161476400-161477400 Enhancers iPS-18 Cell Line embryonic stem cell
35 chr1:161476600-161477000 Enhancers iPS DF 6.9 Cell Line embryonic stem cell
36 chr1:161476600-161477000 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Male --
37 chr1:161476600-161477000 Bivalent Enhancer Foreskin Fibroblast Primary Cells skin01 Skin
38 chr1:161476600-161477000 Bivalent Enhancer Foreskin Fibroblast Primary Cells skin02 Skin
39 chr1:161476600-161477200 Enhancers HUES48 Cell Line embryonic stem cell
40 chr1:161476600-161477200 Enhancers NHLF lung
41 chr1:161476600-161477400 Enhancers H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
42 chr1:161476600-161477400 Enhancers Fetal Stomach stomach
43 chr1:161476600-161480200 Weak transcription Fetal Muscle Trunk muscle
44 chr1:161476600-161480400 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
45 chr1:161476600-161481600 Weak transcription Duodenum Mucosa Duodenum
46 chr1:161476800-161477000 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
47 chr1:161476800-161477000 Bivalent/Poised TSS Fetal Brain Male brain
48 chr1:161476800-161477000 Enhancers HSMM muscle
49 chr1:161476800-161477200 Flanking Active TSS Primary monocytes fromperipheralblood blood
50 chr1:161476800-161477200 Enhancers Fetal Adrenal Gland Adrenal Gland

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