The 2.0 version of rSNPBase

Variant report

Variant rs35949692
Chromosome Location chr1:161302332-161302333
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:124 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:161285200-161321400 Weak transcription Stomach Mucosa stomach
2 chr1:161285400-161303400 Weak transcription Rectal Smooth Muscle rectum
3 chr1:161285400-161303600 Weak transcription NHLF lung
4 chr1:161285400-161310200 Weak transcription HUVEC blood vessel
5 chr1:161285400-161321400 Weak transcription Pancreatic Islets Pancreatic Islet
6 chr1:161285600-161302600 Weak transcription Esophagus oesophagus
7 chr1:161286800-161337400 Weak transcription Fetal Heart heart
8 chr1:161287000-161337400 Weak transcription iPS-15b Cell Line embryonic stem cell
9 chr1:161289600-161317200 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
10 chr1:161293200-161304600 Strong transcription Fetal Intestine Small intestine
11 chr1:161293200-161306600 Strong transcription iPS-20b Cell Line embryonic stem cell
12 chr1:161293200-161307800 Strong transcription Primary B cells from peripheral blood blood
13 chr1:161293200-161315200 Strong transcription HUES48 Cell Line embryonic stem cell
14 chr1:161293200-161317000 Strong transcription Primary T helper cells fromperipheralblood blood
15 chr1:161293200-161317400 Strong transcription HUES64 Cell Line embryonic stem cell
16 chr1:161293400-161307400 Strong transcription Fetal Stomach stomach
17 chr1:161293400-161307800 Strong transcription Primary T helper naive cells fromperipheralblood blood
18 chr1:161293400-161315000 Strong transcription Fetal Intestine Large intestine
19 chr1:161293600-161304400 Strong transcription Lung lung
20 chr1:161293600-161307400 Strong transcription Sigmoid Colon Sigmoid Colon
21 chr1:161293800-161304600 Strong transcription IMR90 fetal lung fibroblasts Cell Line lung
22 chr1:161293800-161304600 Strong transcription Primary mononuclear cells fromperipheralblood Blood
23 chr1:161293800-161304600 Strong transcription Ovary ovary
24 chr1:161293800-161304800 Strong transcription H1 Cell Line embryonic stem cell
25 chr1:161293800-161304800 Strong transcription Primary neutrophils fromperipheralblood blood
26 chr1:161293800-161305000 Strong transcription Breast Myoepithelial Primary Cells Breast
27 chr1:161293800-161305000 Strong transcription Duodenum Smooth Muscle Duodenum
28 chr1:161293800-161305800 Strong transcription Stomach Smooth Muscle stomach
29 chr1:161293800-161306000 Strong transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
30 chr1:161293800-161306000 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
31 chr1:161293800-161306000 Strong transcription Adipose Nuclei Adipose
32 chr1:161293800-161306600 Strong transcription Fetal Lung lung
33 chr1:161293800-161306800 Strong transcription Primary T helper cells PMA-I stimulated --
34 chr1:161293800-161307200 Strong transcription Left Ventricle heart
35 chr1:161293800-161307200 Strong transcription Skeletal Muscle Female skeletal muscle
36 chr1:161293800-161307600 Strong transcription ES-UCSF4 Cell Line embryonic stem cell
37 chr1:161293800-161307600 Strong transcription Duodenum Mucosa Duodenum
38 chr1:161293800-161307600 Strong transcription Fetal Thymus thymus
39 chr1:161293800-161307800 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
40 chr1:161293800-161308000 Strong transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
41 chr1:161293800-161309600 Strong transcription Dnd41 blood
42 chr1:161293800-161313400 Strong transcription Fetal Muscle Leg muscle
43 chr1:161293800-161313400 Strong transcription Placenta Placenta
44 chr1:161293800-161313400 Strong transcription Rectal Mucosa Donor 29 rectum
45 chr1:161293800-161313600 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
46 chr1:161293800-161313600 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
47 chr1:161293800-161317800 Strong transcription Primary monocytes fromperipheralblood blood
48 chr1:161293800-161317800 Strong transcription Monocytes-CD14+_RO01746 blood
49 chr1:161294000-161317000 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
50 chr1:161294000-161317200 Strong transcription Primary T regulatory cells fromperipheralblood blood

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Last update: Aug 31, 2015