The 2.0 version of rSNPBase

Variant report

Variant rs71639056
Chromosome Location chr1:161274448-161274449
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:81 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:161252400-161274800 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
2 chr1:161255200-161274800 Weak transcription Lung lung
3 chr1:161255600-161274600 Weak transcription Adipose Nuclei Adipose
4 chr1:161263200-161274600 Weak transcription Placenta Placenta
5 chr1:161269800-161274800 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
6 chr1:161269800-161274800 Weak transcription Pancreas Pancrea
7 chr1:161270000-161275000 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
8 chr1:161270800-161275000 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
9 chr1:161271000-161274800 Weak transcription HMEC breast
10 chr1:161271200-161274800 Weak transcription Fetal Heart heart
11 chr1:161271400-161274800 Weak transcription Gastric stomach
12 chr1:161272000-161274800 Enhancers HUVEC blood vessel
13 chr1:161272600-161274800 Enhancers Primary T helper naive cells fromperipheralblood blood
14 chr1:161272600-161275200 Enhancers Primary T killer naive cells fromperipheralblood blood
15 chr1:161272800-161274800 Enhancers Breast Myoepithelial Primary Cells Breast
16 chr1:161272800-161274800 Genic enhancers Primary T cells from cord blood blood
17 chr1:161273200-161275000 Enhancers Primary T killer memory cells from peripheral blood blood
18 chr1:161273200-161275000 Enhancers Primary mononuclear cells fromperipheralblood Blood
19 chr1:161273400-161274600 Weak transcription Spleen Spleen
20 chr1:161273400-161274800 Enhancers Primary T helper memory cells from peripheral blood 2 blood
21 chr1:161273400-161274800 Weak transcription Right Atrium heart
22 chr1:161273400-161275000 Enhancers ES-UCSF4 Cell Line embryonic stem cell
23 chr1:161273600-161274800 Enhancers Brain Anterior Caudate brain
24 chr1:161273600-161274800 Weak transcription Left Ventricle heart
25 chr1:161273800-161274600 Enhancers Primary monocytes fromperipheralblood blood
26 chr1:161273800-161274600 Enhancers Primary hematopoietic stem cells blood
27 chr1:161273800-161274800 Enhancers Primary B cells from cord blood blood
28 chr1:161273800-161275000 Enhancers Primary T helper cells PMA-I stimulated --
29 chr1:161273800-161276400 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Male --
30 chr1:161274000-161274600 Enhancers Fetal Brain Female brain
31 chr1:161274000-161275200 Enhancers hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
32 chr1:161274200-161274600 Flanking Active TSS ES-I3 Cell Line embryonic stem cell
33 chr1:161274200-161274600 Enhancers H9 Cell Line embryonic stem cell
34 chr1:161274200-161274600 Flanking Active TSS hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
35 chr1:161274200-161274600 Enhancers HUES6 Cell Line embryonic stem cell
36 chr1:161274200-161274600 Flanking Active TSS HUES64 Cell Line embryonic stem cell
37 chr1:161274200-161274600 Flanking Active TSS Brain Angular Gyrus brain
38 chr1:161274200-161274800 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
39 chr1:161274200-161274800 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
40 chr1:161274200-161274800 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
41 chr1:161274200-161274800 Active TSS Brain Cingulate Gyrus brain
42 chr1:161274200-161274800 Enhancers Brain Hippocampus Middle brain
43 chr1:161274200-161274800 Active TSS Brain Inferior Temporal Lobe brain
44 chr1:161274200-161274800 Enhancers Duodenum Mucosa Duodenum
45 chr1:161274200-161274800 Enhancers Duodenum Smooth Muscle Duodenum
46 chr1:161274200-161274800 Enhancers Fetal Brain Male brain
47 chr1:161274200-161274800 Enhancers Fetal Intestine Large intestine
48 chr1:161274200-161274800 Enhancers Thymus Thymus
49 chr1:161274200-161275000 Enhancers Primary B cells from peripheral blood blood
50 chr1:161274200-161275000 Enhancers Primary T helper 17 cells PMA-I stimulated --

Quick Search:


  
Input of quick search could be:

what's new

Quick links

Copyright © 2015, Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences. All Rights Reserved Feedback
Last update: Aug 31, 2015