The 2.0 version of rSNPBase

Variant report

Variant rs17394957
Chromosome Location chr1:161313437-161313438
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:124 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:161285200-161321400 Weak transcription Stomach Mucosa stomach
2 chr1:161285400-161321400 Weak transcription Pancreatic Islets Pancreatic Islet
3 chr1:161286800-161337400 Weak transcription Fetal Heart heart
4 chr1:161287000-161337400 Weak transcription iPS-15b Cell Line embryonic stem cell
5 chr1:161289600-161317200 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
6 chr1:161293200-161315200 Strong transcription HUES48 Cell Line embryonic stem cell
7 chr1:161293200-161317000 Strong transcription Primary T helper cells fromperipheralblood blood
8 chr1:161293200-161317400 Strong transcription HUES64 Cell Line embryonic stem cell
9 chr1:161293400-161315000 Strong transcription Fetal Intestine Large intestine
10 chr1:161293800-161313600 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
11 chr1:161293800-161313600 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
12 chr1:161293800-161317800 Strong transcription Primary monocytes fromperipheralblood blood
13 chr1:161293800-161317800 Strong transcription Monocytes-CD14+_RO01746 blood
14 chr1:161294000-161317000 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
15 chr1:161294000-161317200 Strong transcription Primary T regulatory cells fromperipheralblood blood
16 chr1:161294200-161318200 Strong transcription Primary hematopoietic stem cells short term culture blood
17 chr1:161294200-161337400 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
18 chr1:161294200-161338200 Weak transcription Small Intestine intestine
19 chr1:161295000-161317000 Strong transcription Primary T cells fromperipheralblood blood
20 chr1:161295000-161317800 Strong transcription Primary Natural Killer cells fromperipheralblood blood
21 chr1:161300200-161317200 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
22 chr1:161300400-161317400 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
23 chr1:161300600-161317200 Strong transcription HUES6 Cell Line embryonic stem cell
24 chr1:161302000-161314200 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
25 chr1:161304200-161314400 Weak transcription A549 lung
26 chr1:161304200-161321400 Weak transcription Gastric stomach
27 chr1:161304600-161326600 Weak transcription Aorta Aorta
28 chr1:161304600-161342600 Weak transcription Esophagus oesophagus
29 chr1:161304800-161329000 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
30 chr1:161304800-161329400 Weak transcription Fetal Kidney kidney
31 chr1:161304800-161334600 Weak transcription Fetal Brain Male brain
32 chr1:161305000-161337800 Weak transcription Placenta Amnion Placenta Amnion
33 chr1:161305400-161337400 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
34 chr1:161305800-161326400 Weak transcription NHLF lung
35 chr1:161306000-161317200 Strong transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
36 chr1:161306000-161317200 Strong transcription Liver Liver
37 chr1:161306000-161317400 Strong transcription Primary mononuclear cells fromperipheralblood Blood
38 chr1:161306600-161316400 Weak transcription Hela-S3 cervix
39 chr1:161306800-161317200 Strong transcription Adipose Nuclei Adipose
40 chr1:161307400-161337600 Weak transcription Psoas Muscle Psoas
41 chr1:161307800-161333000 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
42 chr1:161308400-161313800 Strong transcription Foreskin Keratinocyte Primary Cells skin02 Skin
43 chr1:161308600-161317800 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
44 chr1:161308800-161313600 Strong transcription Fetal Lung lung
45 chr1:161308800-161313600 Strong transcription GM12878-XiMat blood
46 chr1:161308800-161315800 Strong transcription Breast Myoepithelial Primary Cells Breast
47 chr1:161308800-161317200 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
48 chr1:161308800-161317400 Strong transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
49 chr1:161309200-161317200 Strong transcription Primary B cells from peripheral blood blood
50 chr1:161309600-161313600 Strong transcription Fetal Adrenal Gland Adrenal Gland

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Last update: Aug 31, 2015