Variant report

Variant rs7539468
Chromosome Location chr1:161477066-161477067
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:46 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:161474400-161477600 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
2 chr1:161475000-161477200 Flanking Active TSS Monocytes-CD14+_RO01746 blood
3 chr1:161475200-161477400 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
4 chr1:161475200-161477400 Active TSS Brain Anterior Caudate brain
5 chr1:161475200-161477400 Enhancers Fetal Thymus thymus
6 chr1:161475200-161477600 Active TSS Duodenum Smooth Muscle Duodenum
7 chr1:161475400-161477200 Flanking Active TSS Primary hematopoietic stem cells short term culture blood
8 chr1:161475400-161477400 Active TSS Brain Hippocampus Middle brain
9 chr1:161475400-161477600 Active TSS Rectal Mucosa Donor 29 rectum
10 chr1:161475600-161477400 Enhancers Foreskin Melanocyte Primary Cells skin01 Skin
11 chr1:161475600-161477400 Transcr. at gene 5' and 3' K562 blood
12 chr1:161476000-161477400 Enhancers Cortex derived primary cultured neurospheres brain
13 chr1:161476200-161477200 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
14 chr1:161476200-161477200 Active TSS Adipose Nuclei Adipose
15 chr1:161476200-161477400 Enhancers Spleen Spleen
16 chr1:161476200-161478200 Active TSS Primary B cells from cord blood blood
17 chr1:161476200-161482400 Weak transcription Colonic Mucosa Colon
18 chr1:161476400-161477200 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
19 chr1:161476400-161477200 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
20 chr1:161476400-161477200 Flanking Active TSS Primary hematopoietic stem cells blood
21 chr1:161476400-161477200 Enhancers Fetal Lung lung
22 chr1:161476400-161477400 Enhancers iPS-18 Cell Line embryonic stem cell
23 chr1:161476600-161477200 Enhancers HUES48 Cell Line embryonic stem cell
24 chr1:161476600-161477200 Enhancers NHLF lung
25 chr1:161476600-161477400 Enhancers H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
26 chr1:161476600-161477400 Enhancers Fetal Stomach stomach
27 chr1:161476600-161480200 Weak transcription Fetal Muscle Trunk muscle
28 chr1:161476600-161480400 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
29 chr1:161476600-161481600 Weak transcription Duodenum Mucosa Duodenum
30 chr1:161476800-161477200 Flanking Active TSS Primary monocytes fromperipheralblood blood
31 chr1:161476800-161477200 Enhancers Fetal Adrenal Gland Adrenal Gland
32 chr1:161476800-161477400 Enhancers Fetal Kidney kidney
33 chr1:161476800-161477400 Active TSS Placenta Placenta
34 chr1:161476800-161477400 Enhancers HepG2 liver
35 chr1:161476800-161480400 Weak transcription Fetal Muscle Leg muscle
36 chr1:161476800-161483400 Weak transcription HUES6 Cell Line embryonic stem cell
37 chr1:161477000-161477200 Flanking Active TSS Primary mononuclear cells fromperipheralblood Blood
38 chr1:161477000-161477600 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
39 chr1:161477000-161480200 Transcr. at gene 5' and 3' Primary neutrophils fromperipheralblood blood
40 chr1:161477000-161480200 Weak transcription Lung lung
41 chr1:161477000-161480400 Weak transcription Brain Cingulate Gyrus brain
42 chr1:161477000-161480600 Weak transcription Brain Substantia Nigra brain
43 chr1:161477000-161481600 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
44 chr1:161477000-161482400 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
45 chr1:161477000-161482400 Weak transcription Hela-S3 cervix
46 chr1:161477000-161482400 Weak transcription Osteobl bone

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