The 2.0 version of rSNPBase

Variant report

Variant rs72714962
Chromosome Location chr1:161278778-161278779
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:65 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:161276000-161279600 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
2 chr1:161276000-161283800 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
3 chr1:161276200-161278800 Enhancers ES-UCSF4 Cell Line embryonic stem cell
4 chr1:161276200-161278800 Enhancers Muscle Satellite Cultured Cells --
5 chr1:161276200-161283200 Weak transcription Primary hematopoietic stem cells blood
6 chr1:161276200-161283600 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
7 chr1:161276400-161278800 Enhancers Brain Hippocampus Middle brain
8 chr1:161276400-161279000 Enhancers NHDF-Ad bronchial
9 chr1:161276400-161279600 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
10 chr1:161276400-161282200 Enhancers Fetal Adrenal Gland Adrenal Gland
11 chr1:161276400-161283400 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
12 chr1:161276400-161283400 Weak transcription Primary mononuclear cells fromperipheralblood Blood
13 chr1:161276400-161283400 Weak transcription Liver Liver
14 chr1:161276400-161283600 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
15 chr1:161276600-161281200 Weak transcription Fetal Kidney kidney
16 chr1:161276600-161282800 Weak transcription Brain Cingulate Gyrus brain
17 chr1:161276600-161283400 Weak transcription HUES64 Cell Line embryonic stem cell
18 chr1:161276600-161283400 Weak transcription Primary T killer naive cells fromperipheralblood blood
19 chr1:161276600-161283400 Weak transcription Primary T killer memory cells from peripheral blood blood
20 chr1:161276600-161283400 Weak transcription Right Atrium heart
21 chr1:161276600-161283600 Weak transcription HUES48 Cell Line embryonic stem cell
22 chr1:161276800-161283400 Weak transcription Primary T helper naive cells from peripheral blood blood
23 chr1:161276800-161283400 Weak transcription Brain Angular Gyrus brain
24 chr1:161276800-161283400 Weak transcription Brain Anterior Caudate brain
25 chr1:161277000-161278800 Enhancers HSMMtube muscle
26 chr1:161277000-161281000 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
27 chr1:161277000-161283600 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
28 chr1:161277200-161278800 Enhancers Foreskin Melanocyte Primary Cells skin01 Skin
29 chr1:161277200-161280200 Weak transcription NHEK skin
30 chr1:161277200-161283000 Weak transcription Brain Inferior Temporal Lobe brain
31 chr1:161277200-161283400 Weak transcription Primary T cells fromperipheralblood blood
32 chr1:161277200-161283400 Weak transcription Primary T helper 17 cells PMA-I stimulated --
33 chr1:161277200-161283400 Weak transcription Primary T helper cells fromperipheralblood blood
34 chr1:161277200-161283400 Weak transcription Esophagus oesophagus
35 chr1:161277200-161283400 Weak transcription Pancreas Pancrea
36 chr1:161277200-161283400 Weak transcription Spleen Spleen
37 chr1:161277200-161283600 Weak transcription Left Ventricle heart
38 chr1:161277400-161281600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
39 chr1:161277400-161282400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
40 chr1:161277400-161283200 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
41 chr1:161277400-161283200 Weak transcription Duodenum Mucosa Duodenum
42 chr1:161277400-161283400 Weak transcription H9 Cell Line embryonic stem cell
43 chr1:161277400-161283400 Weak transcription Primary T helper naive cells fromperipheralblood blood
44 chr1:161277400-161283400 Weak transcription Rectal Mucosa Donor 29 rectum
45 chr1:161277600-161279400 Enhancers K562 blood
46 chr1:161277800-161279000 Enhancers iPS-15b Cell Line embryonic stem cell
47 chr1:161278000-161278800 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
48 chr1:161278000-161279000 Enhancers Breast Myoepithelial Primary Cells Breast
49 chr1:161278000-161279800 Active TSS Duodenum Smooth Muscle Duodenum
50 chr1:161278200-161278800 Enhancers HepG2 liver

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Last update: Aug 31, 2015