Variant report

Variant rs9427400
Chromosome Location chr1:161477204-161477205
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:42 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:161474400-161477600 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
2 chr1:161475200-161477400 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
3 chr1:161475200-161477400 Active TSS Brain Anterior Caudate brain
4 chr1:161475200-161477400 Enhancers Fetal Thymus thymus
5 chr1:161475200-161477600 Active TSS Duodenum Smooth Muscle Duodenum
6 chr1:161475400-161477400 Active TSS Brain Hippocampus Middle brain
7 chr1:161475400-161477600 Active TSS Rectal Mucosa Donor 29 rectum
8 chr1:161475600-161477400 Enhancers Foreskin Melanocyte Primary Cells skin01 Skin
9 chr1:161475600-161477400 Transcr. at gene 5' and 3' K562 blood
10 chr1:161476000-161477400 Enhancers Cortex derived primary cultured neurospheres brain
11 chr1:161476200-161477400 Enhancers Spleen Spleen
12 chr1:161476200-161478200 Active TSS Primary B cells from cord blood blood
13 chr1:161476200-161482400 Weak transcription Colonic Mucosa Colon
14 chr1:161476400-161477400 Enhancers iPS-18 Cell Line embryonic stem cell
15 chr1:161476600-161477400 Enhancers H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
16 chr1:161476600-161477400 Enhancers Fetal Stomach stomach
17 chr1:161476600-161480200 Weak transcription Fetal Muscle Trunk muscle
18 chr1:161476600-161480400 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
19 chr1:161476600-161481600 Weak transcription Duodenum Mucosa Duodenum
20 chr1:161476800-161477400 Enhancers Fetal Kidney kidney
21 chr1:161476800-161477400 Active TSS Placenta Placenta
22 chr1:161476800-161477400 Enhancers HepG2 liver
23 chr1:161476800-161480400 Weak transcription Fetal Muscle Leg muscle
24 chr1:161476800-161483400 Weak transcription HUES6 Cell Line embryonic stem cell
25 chr1:161477000-161477600 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
26 chr1:161477000-161480200 Transcr. at gene 5' and 3' Primary neutrophils fromperipheralblood blood
27 chr1:161477000-161480200 Weak transcription Lung lung
28 chr1:161477000-161480400 Weak transcription Brain Cingulate Gyrus brain
29 chr1:161477000-161480600 Weak transcription Brain Substantia Nigra brain
30 chr1:161477000-161481600 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
31 chr1:161477000-161482400 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
32 chr1:161477000-161482400 Weak transcription Hela-S3 cervix
33 chr1:161477000-161482400 Weak transcription Osteobl bone
34 chr1:161477200-161477400 Enhancers Primary hematopoietic stem cells short term culture blood
35 chr1:161477200-161477400 Enhancers Primary mononuclear cells fromperipheralblood Blood
36 chr1:161477200-161477600 Transcr. at gene 5' and 3' Primary monocytes fromperipheralblood blood
37 chr1:161477200-161477800 Active TSS Primary hematopoietic stem cells blood
38 chr1:161477200-161478400 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
39 chr1:161477200-161479400 Transcr. at gene 5' and 3' Monocytes-CD14+_RO01746 blood
40 chr1:161477200-161480200 Weak transcription Fetal Lung lung
41 chr1:161477200-161480800 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
42 chr1:161477200-161482600 Weak transcription Adipose Nuclei Adipose

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