Variant report

Variant rs9427398
Chromosome Location chr1:161476205-161476206
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:40 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:161474200-161476400 Weak transcription Osteobl bone
2 chr1:161474400-161477000 Flanking Active TSS Primary neutrophils fromperipheralblood blood
3 chr1:161474400-161477600 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
4 chr1:161474800-161476800 Enhancers Primary B cells from peripheral blood blood
5 chr1:161475000-161476400 Flanking Active TSS Primary monocytes fromperipheralblood blood
6 chr1:161475000-161476600 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
7 chr1:161475000-161477000 Enhancers GM12878-XiMat blood
8 chr1:161475000-161477200 Flanking Active TSS Monocytes-CD14+_RO01746 blood
9 chr1:161475200-161476400 Active TSS Duodenum Mucosa Duodenum
10 chr1:161475200-161477000 Active TSS Brain Substantia Nigra brain
11 chr1:161475200-161477000 Enhancers Lung lung
12 chr1:161475200-161477400 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
13 chr1:161475200-161477400 Active TSS Brain Anterior Caudate brain
14 chr1:161475200-161477400 Enhancers Fetal Thymus thymus
15 chr1:161475200-161477600 Active TSS Duodenum Smooth Muscle Duodenum
16 chr1:161475400-161477000 Enhancers HUVEC blood vessel
17 chr1:161475400-161477200 Flanking Active TSS Primary hematopoietic stem cells short term culture blood
18 chr1:161475400-161477400 Active TSS Brain Hippocampus Middle brain
19 chr1:161475400-161477600 Active TSS Rectal Mucosa Donor 29 rectum
20 chr1:161475600-161476800 Flanking Active TSS Fetal Adrenal Gland Adrenal Gland
21 chr1:161475600-161477000 Active TSS Primary mononuclear cells fromperipheralblood Blood
22 chr1:161475600-161477000 Active TSS Brain Cingulate Gyrus brain
23 chr1:161475600-161477400 Enhancers Foreskin Melanocyte Primary Cells skin01 Skin
24 chr1:161475600-161477400 Transcr. at gene 5' and 3' K562 blood
25 chr1:161475800-161476600 Active TSS Left Ventricle heart
26 chr1:161475800-161476800 Bivalent/Poised TSS Skeletal Muscle Female skeletal muscle
27 chr1:161475800-161476800 Flanking Active TSS HepG2 liver
28 chr1:161476000-161476400 Enhancers H1 Cell Line embryonic stem cell
29 chr1:161476000-161476400 Enhancers Primary hematopoietic stem cells blood
30 chr1:161476000-161476600 Bivalent/Poised TSS Stomach Smooth Muscle stomach
31 chr1:161476000-161477400 Enhancers Cortex derived primary cultured neurospheres brain
32 chr1:161476200-161476600 Enhancers iPS DF 19.11 Cell Line embryonic stem cell
33 chr1:161476200-161476600 Active TSS Fetal Muscle Leg muscle
34 chr1:161476200-161476800 Enhancers HUES6 Cell Line embryonic stem cell
35 chr1:161476200-161476800 Flanking Active TSS Placenta Placenta
36 chr1:161476200-161477200 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
37 chr1:161476200-161477200 Active TSS Adipose Nuclei Adipose
38 chr1:161476200-161477400 Enhancers Spleen Spleen
39 chr1:161476200-161478200 Active TSS Primary B cells from cord blood blood
40 chr1:161476200-161482400 Weak transcription Colonic Mucosa Colon

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