Variant report

Variant rs9427399
Chromosome Location chr1:161476533-161476534
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:49 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:161474400-161477000 Flanking Active TSS Primary neutrophils fromperipheralblood blood
2 chr1:161474400-161477600 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
3 chr1:161474800-161476800 Enhancers Primary B cells from peripheral blood blood
4 chr1:161475000-161476600 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
5 chr1:161475000-161477000 Enhancers GM12878-XiMat blood
6 chr1:161475000-161477200 Flanking Active TSS Monocytes-CD14+_RO01746 blood
7 chr1:161475200-161477000 Active TSS Brain Substantia Nigra brain
8 chr1:161475200-161477000 Enhancers Lung lung
9 chr1:161475200-161477400 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
10 chr1:161475200-161477400 Active TSS Brain Anterior Caudate brain
11 chr1:161475200-161477400 Enhancers Fetal Thymus thymus
12 chr1:161475200-161477600 Active TSS Duodenum Smooth Muscle Duodenum
13 chr1:161475400-161477000 Enhancers HUVEC blood vessel
14 chr1:161475400-161477200 Flanking Active TSS Primary hematopoietic stem cells short term culture blood
15 chr1:161475400-161477400 Active TSS Brain Hippocampus Middle brain
16 chr1:161475400-161477600 Active TSS Rectal Mucosa Donor 29 rectum
17 chr1:161475600-161476800 Flanking Active TSS Fetal Adrenal Gland Adrenal Gland
18 chr1:161475600-161477000 Active TSS Primary mononuclear cells fromperipheralblood Blood
19 chr1:161475600-161477000 Active TSS Brain Cingulate Gyrus brain
20 chr1:161475600-161477400 Enhancers Foreskin Melanocyte Primary Cells skin01 Skin
21 chr1:161475600-161477400 Transcr. at gene 5' and 3' K562 blood
22 chr1:161475800-161476600 Active TSS Left Ventricle heart
23 chr1:161475800-161476800 Bivalent/Poised TSS Skeletal Muscle Female skeletal muscle
24 chr1:161475800-161476800 Flanking Active TSS HepG2 liver
25 chr1:161476000-161476600 Bivalent/Poised TSS Stomach Smooth Muscle stomach
26 chr1:161476000-161477400 Enhancers Cortex derived primary cultured neurospheres brain
27 chr1:161476200-161476600 Enhancers iPS DF 19.11 Cell Line embryonic stem cell
28 chr1:161476200-161476600 Active TSS Fetal Muscle Leg muscle
29 chr1:161476200-161476800 Enhancers HUES6 Cell Line embryonic stem cell
30 chr1:161476200-161476800 Flanking Active TSS Placenta Placenta
31 chr1:161476200-161477200 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
32 chr1:161476200-161477200 Active TSS Adipose Nuclei Adipose
33 chr1:161476200-161477400 Enhancers Spleen Spleen
34 chr1:161476200-161478200 Active TSS Primary B cells from cord blood blood
35 chr1:161476200-161482400 Weak transcription Colonic Mucosa Colon
36 chr1:161476400-161476600 Flanking Active TSS Duodenum Mucosa Duodenum
37 chr1:161476400-161476800 Enhancers ES-I3 Cell Line embryonic stem cell
38 chr1:161476400-161476800 Active TSS Primary monocytes fromperipheralblood blood
39 chr1:161476400-161476800 Bivalent Enhancer Fetal Intestine Small intestine
40 chr1:161476400-161477000 Enhancers iPS-20b Cell Line embryonic stem cell
41 chr1:161476400-161477000 Enhancers ES-UCSF4 Cell Line embryonic stem cell
42 chr1:161476400-161477000 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
43 chr1:161476400-161477000 Enhancers Hela-S3 cervix
44 chr1:161476400-161477000 Enhancers Osteobl bone
45 chr1:161476400-161477200 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
46 chr1:161476400-161477200 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
47 chr1:161476400-161477200 Flanking Active TSS Primary hematopoietic stem cells blood
48 chr1:161476400-161477200 Enhancers Fetal Lung lung
49 chr1:161476400-161477400 Enhancers iPS-18 Cell Line embryonic stem cell

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