Variant report

rSNPs within LD-proxies of this variant (count:35)

rs_ID	r²[population]
rs287311	0.86[AFR][1000 genomes]
rs287335	1.00[AFR][1000 genomes];0.87[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs287380	0.83[EUR][1000 genomes]
rs287382	0.83[EUR][1000 genomes]
rs414259	0.93[AFR][1000 genomes];0.87[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs470150	0.87[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs537778	0.87[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs665286	0.87[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs73200299	0.81[EUR][1000 genomes]
rs73201907	0.81[EUR][1000 genomes]
rs73201909	0.81[EUR][1000 genomes]
rs73206169	0.81[EUR][1000 genomes]
rs73206170	0.81[EUR][1000 genomes]
rs73206171	0.81[EUR][1000 genomes]
rs73206174	0.81[EUR][1000 genomes]
rs73206176	0.81[EUR][1000 genomes]
rs73206182	0.81[EUR][1000 genomes]
rs9529365	0.81[EUR][1000 genomes]
rs9529366	0.81[EUR][1000 genomes]
rs9529411	0.81[EUR][1000 genomes]
rs9529412	0.81[EUR][1000 genomes]
rs9529413	0.81[EUR][1000 genomes]
rs9541432	0.81[EUR][1000 genomes]
rs9541433	0.81[EUR][1000 genomes]
rs9541441	0.81[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs9541451	0.81[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs9541458	0.81[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs9541483	0.81[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs9541503	0.81[EUR][1000 genomes]
rs9541506	0.81[EUR][1000 genomes]
rs9541507	0.81[EUR][1000 genomes]
rs9541508	0.81[EUR][1000 genomes]
rs9541509	0.81[EUR][1000 genomes]
rs9541510	0.81[EUR][1000 genomes]
rs9541511	0.81[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:5 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv528660	chr13:68981659-69205918	Enhancers Active TSS ZNF genes & repeats Flanking Active TSS Weak transcription	TF binding region CpG island Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
2	nsv1040959	chr13:69003437-69199511	ZNF genes & repeats Enhancers Flanking Active TSS Weak transcription Active TSS	Chromatin interactive region	n/a	inside rSNPs	diseases
3	nsv1048225	chr13:69003437-69200522	Weak transcription Enhancers Flanking Active TSS ZNF genes & repeats Active TSS	Chromatin interactive region	n/a	inside rSNPs	diseases
4	nsv1050299	chr13:69159723-69201233	Enhancers Flanking Active TSS Weak transcription ZNF genes & repeats Active TSS	Chromatin interactive region	n/a	inside rSNPs	diseases
5	nsv900440	chr13:69171580-69282276	Enhancers Active TSS Weak transcription ZNF genes & repeats Flanking Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr13:69190800-69191800	Enhancers	HepG2	liver

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