Variant report

Variant rs3795790
Chromosome Location chr1:228476367-228476368
allele A/T
Outlinks Ensembl   UCSC
Chromatin state (count:70 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:228455400-228484800 Weak transcription A549 lung
2 chr1:228456400-228485800 Weak transcription Hela-S3 cervix
3 chr1:228463800-228481400 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
4 chr1:228464200-228478000 Strong transcription Dnd41 blood
5 chr1:228464200-228491600 Weak transcription Primary T killer memory cells from peripheral blood blood
6 chr1:228464400-228478400 Strong transcription Thymus Thymus
7 chr1:228464400-228479600 Weak transcription Right Atrium heart
8 chr1:228464400-228481400 Weak transcription Duodenum Smooth Muscle Duodenum
9 chr1:228464400-228482000 Weak transcription Fetal Kidney kidney
10 chr1:228464400-228489200 Strong transcription Left Ventricle heart
11 chr1:228464600-228476800 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
12 chr1:228464600-228481400 Weak transcription Primary hematopoietic stem cells blood
13 chr1:228464600-228483200 Strong transcription IMR90 fetal lung fibroblasts Cell Line lung
14 chr1:228464600-228483200 Strong transcription Fetal Intestine Small intestine
15 chr1:228464600-228487000 Strong transcription Breast Myoepithelial Primary Cells Breast
16 chr1:228464800-228476800 Strong transcription HUES6 Cell Line embryonic stem cell
17 chr1:228464800-228477400 Strong transcription Primary T cells from cord blood blood
18 chr1:228465000-228483600 Strong transcription Right Ventricle heart
19 chr1:228465000-228498000 Weak transcription Fetal Brain Male brain
20 chr1:228465200-228483400 Weak transcription Colonic Mucosa Colon
21 chr1:228465200-228483400 Strong transcription Fetal Stomach stomach
22 chr1:228465600-228483400 Strong transcription Fetal Brain Female brain
23 chr1:228465800-228476600 Strong transcription Primary T helper naive cells fromperipheralblood blood
24 chr1:228466200-228477200 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
25 chr1:228467200-228484200 Weak transcription Sigmoid Colon Sigmoid Colon
26 chr1:228468400-228482600 Weak transcription Primary T regulatory cells fromperipheralblood blood
27 chr1:228469200-228479800 Weak transcription Pancreas Pancrea
28 chr1:228471200-228484200 Weak transcription Primary hematopoietic stem cells short term culture blood
29 chr1:228471600-228481400 Weak transcription Aorta Aorta
30 chr1:228471800-228483400 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
31 chr1:228471800-228489200 Weak transcription Duodenum Mucosa Duodenum
32 chr1:228472000-228477200 Strong transcription Fetal Muscle Trunk muscle
33 chr1:228472000-228482000 Strong transcription Skeletal Muscle Female skeletal muscle
34 chr1:228472200-228476600 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
35 chr1:228472200-228481600 Weak transcription HUES64 Cell Line embryonic stem cell
36 chr1:228472200-228484800 Strong transcription Fetal Muscle Leg muscle
37 chr1:228472200-228490000 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
38 chr1:228472400-228481200 Weak transcription iPS-20b Cell Line embryonic stem cell
39 chr1:228472400-228486000 Weak transcription H9 Cell Line embryonic stem cell
40 chr1:228472400-228486200 Weak transcription iPS-18 Cell Line embryonic stem cell
41 chr1:228472600-228481400 Weak transcription Fetal Thymus thymus
42 chr1:228472800-228479800 Weak transcription H1 Cell Line embryonic stem cell
43 chr1:228473000-228488400 Weak transcription Pancreatic Islets Pancreatic Islet
44 chr1:228473200-228476600 Strong transcription Foreskin Keratinocyte Primary Cells skin02 Skin
45 chr1:228473400-228476800 Strong transcription Gastric stomach
46 chr1:228473400-228477000 Strong transcription Lung lung
47 chr1:228473400-228478000 Strong transcription Spleen Spleen
48 chr1:228473400-228478800 Strong transcription Placenta Amnion Placenta Amnion
49 chr1:228473600-228478600 Strong transcription ES-UCSF4 Cell Line embryonic stem cell
50 chr1:228473600-228480800 Weak transcription Fetal Heart heart

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